RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 HLA-GP17693 338 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 FCGR2CP31995 323 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 MSMO1Q15800 293 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 TIMM50Q3ZCQ8 353 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-213ENST00000540725 OR4A47Q6IF82 309 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 OR13F1Q8NGS4 319 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 FCGR1BQ92637 280 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 BET1LQ9NYM9 111 aa10.61□□□□□ -0.71
SNHG1-213ENST00000540725 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 TRAV18A0A075B6X5 111 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 MFSD2BA6NFX1 497 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 CGB1A6NKQ9 187 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 DEFA4P12838 97 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 SDC2P34741 201 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 GVQW1Q8N7I0 195 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 SLC25A38Q96DW6 304 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 HRASLSQ9HDD0 168 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 MLXQ9UH92 298 aa10.6□□□□□ -0.71
SNHG1-213ENST00000540725 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNHG1-213ENST00000540725 PPYP01298 95 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 CLEC2LP0C7M8 214 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 OR2B8PP59922 312 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 MXD1Q05195 221 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 HOGA1Q86XE5 327 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 ZBTB34Q8NCN2 500 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 OR52B4Q8NGK2 314 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 OR5H6Q8NGV6 325 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
SNHG1-213ENST00000540725 IGLC7A0M8Q6 106 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 SULT1C2O00338 296 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
SNHG1-213ENST00000540725 CLEC3BP05452 202 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 SCAND1P57086 179 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 FXYD4P59646 89 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 CATR1Q13166 79 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 RNF167Q9H6Y7 350 aa10.58□□□□□ -0.72
SNHG1-213ENST00000540725 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 FCER2P06734 321 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 NQO2P16083 231 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 GPR183P32249 361 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 TAS2R31P59538 309 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 POU2AF1Q16633 256 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 IDNKQ5T6J7 187 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 ZNF773Q6PK81 442 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 ZNF502Q8TBZ5 544 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 MARC2Q969Z3 335 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 GGTLC1Q9BX51 225 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 COMMD5Q9GZQ3 224 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 AUNIPQ9H7T9 357 aa10.57□□□□□ -0.72
SNHG1-213ENST00000540725 A0A0A6YYH2 397 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 IGHV3-35A0A0C4DH35 117 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 LOC100506127A0A0U1RQW1 187 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 A6NJ64 397 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 UPK2O00526 184 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 HPRT1P00492 218 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 TMEM17Q86X19 198 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 OR51H1Q8NH63 302 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
SNHG1-213ENST00000540725 YTHDF1Q9BYJ9 559 aaKnown RBP10.56□□□□□ -0.72
SNHG1-213ENST00000540725 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
SNHG1-213ENST00000540725 LOC102724200A0A096LPH7 203 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-213ENST00000540725 S1PR2O95136 353 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 C8orf88P0DMB2 117 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.723e-55■■□□□ 13.5
SNHG1-213ENST00000540725 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-213ENST00000540725 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 AADACL3Q5VUY0 350 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 PLET1Q6UQ28 207 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
SNHG1-213ENST00000540725 DMBX1Q8NFW5 382 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 OR5AP2Q8NGF4 316 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 GIMAP1Q8WWP7 306 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
SNHG1-213ENST00000540725 PLEKHA2Q9HB19 425 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 DIABLOQ9NR28 239 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 THYN1Q9P016 225 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 MRPL27Q9P0M9 148 aaKnown RBP10.55□□□□□ -0.72
SNHG1-213ENST00000540725 UFC1Q9Y3C8 167 aa10.55□□□□□ -0.72
SNHG1-213ENST00000540725 FGF2P09038 288 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 RPA2P15927 270 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 CBX5P45973 191 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 HERV-K104P61576 105 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 GDPD1Q8N9F7 314 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 OR10W1Q8NGF6 305 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms