RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PARP11Q9NR21 331 aa13.1□□□□□ -0.31
UBC-208ENST00000540700 G3V318 75 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 OPN1MWP04001 364 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 IGF1P05019 195 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 DEFA1P59665 94 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 DEFA3P59666 94 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 OR2B8PP59922 312 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
UBC-208ENST00000540700 ERVK-16P61578 105 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 DCTN2Q13561 401 aaKnown RBP13.09□□□□□ -0.31
UBC-208ENST00000540700 FXYD3Q14802 87 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 TNXAQ16473 311 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 LYG2Q86SG7 212 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 STPG2Q8N412 459 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 SLC35G3Q8N808 338 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 VSTM2AQ8TAG5 236 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 ARPC1AQ92747 370 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 RBPMSQ93062 196 aaKnown RBP13.09□□□□□ -0.31
UBC-208ENST00000540700 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
UBC-208ENST00000540700 A0A0B4J293 547 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 TEX22C9J3V5 150 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 G3V4G9 280 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
UBC-208ENST00000540700 CRIP2P52943 208 aaPredicted RBP13.08□□□□□ -0.32
UBC-208ENST00000540700 ZNF329Q86UD4 541 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 MMD2Q8IY49 270 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 CADM3Q8N126 398 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 OR4A5Q8NH83 315 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 GRPEL2Q8TAA5 225 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 GPR146Q96CH1 333 aa13.08□□□□□ -0.32
UBC-208ENST00000540700 ALX4Q9H161 411 aaPredicted RBP13.08□□□□□ -0.32
UBC-208ENST00000540700 AP4M1O00189 453 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 SOX15O60248 233 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 APELAP0DMC3 54 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 HLA-GP17693 338 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 AKR1C2P52895 323 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
UBC-208ENST00000540700 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 ARSJQ5FYB0 599 aaPredicted RBP13.07□□□□□ -0.32
UBC-208ENST00000540700 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 ZNF695Q8IW36 515 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 SRSF12Q8WXF0 261 aaKnown RBP13.07□□□□□ -0.32
UBC-208ENST00000540700 IL22RA2Q969J5 263 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 MARVELD1Q9BSK0 173 aa13.07□□□□□ -0.32
UBC-208ENST00000540700 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 C15orf61A6NNL5 157 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 PTTG1O95997 202 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 ANXA3P12429 323 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 PPIFP30405 207 aaKnown RBP13.06□□□□□ -0.32
UBC-208ENST00000540700 ECSCRQ19T08 205 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 TCTEX1D4Q5JR98 221 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 C19orf35Q6ZS72 473 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 LGI3Q8N145 548 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 LFNGQ8NES3 379 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 QTRT1Q9BXR0 403 aaKnown RBP13.06□□□□□ -0.32
UBC-208ENST00000540700 TMEM14BQ9NUH8 114 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
UBC-208ENST00000540700 A0A0B4J2A0 478 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 TEX50A0A1B0GTY4 177 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 INMT-MINDY4F8WBC2 141 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 CNIH1O95406 144 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
UBC-208ENST00000540700 C2orf68Q2NKX9 166 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 PLET1Q6UQ28 207 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 FOXRED2Q8IWF2 684 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 ABHD5Q8WTS1 349 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 SHPKQ9UHJ6 478 aa13.05□□□□□ -0.32
UBC-208ENST00000540700 TNCP24821 2201 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 TRAV41A0A0B4J266 112 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 ADAP1O75689 374 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
UBC-208ENST00000540700 IL5P05113 134 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 CD28P10747 220 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 MAS1LP35410 378 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 ZNF431Q8TF32 576 aaPredicted RBP13.04□□□□□ -0.32
UBC-208ENST00000540700 LSM10Q969L4 123 aaKnown RBP13.04□□□□□ -0.32
UBC-208ENST00000540700 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 FOXA2Q9Y261 457 aaPredicted RBP13.04□□□□□ -0.32
UBC-208ENST00000540700 OR51B2Q9Y5P1 312 aa13.04□□□□□ -0.32
UBC-208ENST00000540700 PSMB11A5LHX3 300 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 CREBL2O60519 120 aaPredicted RBP13.03□□□□□ -0.32
UBC-208ENST00000540700 FGF2P09038 288 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms