RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 VPREB3Q9UKI3 123 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 MGAM2Q2M2H8 2515 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 IGHV1-3A0A0C4DH29 117 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 A0A0D9SG52 128 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 SRRM4A7MD48 611 aaKnown RBP8.46□□□□□ -1.06
ATL3-204ENST00000540699 E5RGE8 158 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 H3BUX3 64 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 RLN2P04090 185 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 GAPDHP04406 335 aaKnown RBP8.46□□□□□ -1.06
ATL3-204ENST00000540699 HKR1P10072 659 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 S100A11P31949 105 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 ERVK-16P61578 105 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 RELBQ01201 579 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 OPCMLQ14982 345 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 TMUB2Q71RG4 321 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 H2BFWTQ7Z2G1 175 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 FOXRED2Q8IWF2 684 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 OSR1Q8TAX0 266 aaPredicted RBP8.46□□□□□ -1.06
ATL3-204ENST00000540699 CFHR4Q92496 578 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 RPEQ96AT9 228 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 TCF19Q9Y242 345 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 NSG2Q9Y328 171 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 WASHC3Q9Y3C0 194 aa8.46□□□□□ -1.06
ATL3-204ENST00000540699 A6NDX4 124 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 KCNAB3O43448 404 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 GPR137BO60478 399 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 TMEM50AO95807 157 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 HRASP01112 189 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 BRS3P32247 399 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 MC5RP33032 325 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 P2RY1P47900 373 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 RAB13P51153 203 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 PAX9P55771 341 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 TNFRSF9Q07011 255 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 PDLIM3Q53GG5 364 aaPredicted RBP8.45□□□□□ -1.06
ATL3-204ENST00000540699 OR4A47Q6IF82 309 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 SSX9Q7RTT3 188 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 THNSL2Q86YJ6 484 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 VKORC1L1Q8N0U8 176 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 PUSL1Q8N0Z8 303 aaKnown RBP8.45□□□□□ -1.06
ATL3-204ENST00000540699 OR4C13Q8NGP0 309 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 RHOVQ96L33 236 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 GON7Q9BXV9 100 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 ARL6Q9H0F7 186 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 MAGT1Q9H0U3 335 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 SLA2Q9H6Q3 261 aa8.45□□□□□ -1.06
ATL3-204ENST00000540699 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.45□□□□□ -1.06
ATL3-204ENST00000540699 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 FAM181BA6NEQ2 426 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 C15orf61A6NNL5 157 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 RGS13O14921 159 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 TIMM23O14925 209 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 BCL2L11O43521 198 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 SYNGR2O43760 224 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 CHST1O43916 411 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 SSSCA1O60232 199 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 NXPH3O95157 252 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 SAA1P0DJI8 122 aaPredicted RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 C4BPBP20851 252 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 EBI3Q14213 229 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 C12orf54Q6X4T0 127 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 ZNF429Q86V71 674 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 INO80EQ8NBZ0 244 aaPredicted RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 FLYWCH2Q96CP2 140 aaKnown RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 HARBI1Q96MB7 349 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 RAB40CQ96S21 281 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 QTRT1Q9BXR0 403 aaKnown RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 BET1LQ9NYM9 111 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 PITPNC1Q9UKF7 332 aa8.44□□□□□ -1.06
ATL3-204ENST00000540699 FOXA2Q9Y261 457 aaPredicted RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 TET2Q6N021 2002 aaPredicted RBP8.44□□□□□ -1.06
ATL3-204ENST00000540699 IGHV3-72A0A0B4J1Y9 119 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 H7C2Y5 167 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 UPK2O00526 184 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 SHOXO15266 292 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 NDUFA7O95182 113 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 PVALBP20472 110 aaPredicted RBP8.43□□□□□ -1.06
ATL3-204ENST00000540699 CD1BP29016 333 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
ATL3-204ENST00000540699 AP2S1P53680 142 aaPredicted RBP8.43□□□□□ -1.06
ATL3-204ENST00000540699 TAS2R30P59541 319 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 OR2B8PP59922 312 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 UBE2KP61086 200 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 FBLN7Q53RD9 439 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 C16orf82Q7Z2V1 217 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 OR2C3Q8N628 320 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 RITA1Q96K30 269 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 SMIM8Q96KF7 97 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 AIFM2Q9BRQ8 373 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 RBKSQ9H477 322 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms