RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 FCER2P06734 321 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 C8orf88P0DMB2 117 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 DEFA4P12838 97 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 OR2B8PP59922 312 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF773Q6PK81 442 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 SECTM1Q8WVN6 248 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 CENPOQ9BU64 300 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 DCSTAMPQ9H295 470 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 ANXA10Q9UJ72 324 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 DNAH6Q9C0G6 4158 aa10.58□□□□□ -0.72
SEMA4D-222ENST00000540183 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 IGLC7A0M8Q6 106 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 HRASP01112 189 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 RPA2P15927 270 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 HIST1H1BP16401 226 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 GNG2P59768 71 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 RBPMS2Q6ZRY4 209 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 SPAG16Q8N0X2 631 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 RPP25LQ8N5L8 163 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 OR10W1Q8NGF6 305 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 LGALS14Q8TCE9 139 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 CNBD2Q96M20 576 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 HRASLSQ9HDD0 168 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 DAPK2Q9UIK4 370 aa10.57□□□□□ -0.72
SEMA4D-222ENST00000540183 IGHV3OR16-8A0A075B7F1 116 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 SULT1C2O00338 296 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 SPRY2O43597 315 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 DHFRP00374 187 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 FCGR2CP31995 323 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 ARL6IP1Q15041 203 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 ANKRD55Q3KP44 614 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 ODF3L2Q3SX64 289 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF66Q6ZN08 573 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 OR2C3Q8N628 320 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 CXorf58Q96LI9 332 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 TXNL4BQ9NX01 149 aaKnown RBP10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 BET1LQ9NYM9 111 aa10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
SEMA4D-222ENST00000540183 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 NUPR2A6NF83 97 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 NOTOA8MTQ0 251 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 UPK2O00526 184 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 CLEC2LP0C7M8 214 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 RPL35AP18077 110 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 PLET1Q6UQ28 207 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 OR13F1Q8NGS4 319 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF436Q9C0F3 470 aaPredicted RBP10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 UFC1Q9Y3C8 167 aa10.55□□□□□ -0.72
SEMA4D-222ENST00000540183 TGOLN2O43493 480 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 DEDDO75618 318 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 PPYP01298 95 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 GALP22466 123 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 MFAP2P55001 183 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 FXYD4P59646 89 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 ARPC4P59998 168 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF124Q15973 351 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 IZUMO2Q6UXV1 221 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 BEST4Q8NFU0 473 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 TMEM190Q8WZ59 177 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 MARC2Q969Z3 335 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 SLC5A7Q9GZV3 580 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 C5orf66Q9H5L9 145 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 RNF167Q9H6Y7 350 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 TMEM140Q9NV12 185 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 RHBDL2Q9NX52 303 aa10.54□□□□□ -0.72
SEMA4D-222ENST00000540183 TRAV18A0A075B6X5 111 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 PTBP1P26599 531 aaKnown RBP eCLIP10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 FCGR2BP31994 310 aaPredicted RBP10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 BMI1P35226 326 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 APOC4P55056 127 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 ELLP55199 621 aaPredicted RBP10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 SFXN4Q6P4A7 337 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 ZNF818PQ6ZRF7 136 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 Q6ZWC4 215 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 RNF183Q96D59 192 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 SLC25A38Q96DW6 304 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 CHRDL1Q9BU40 450 aa10.53□□□□□ -0.72
SEMA4D-222ENST00000540183 MEIS3P1A6NDR6 274 aa10.52□□□□□ -0.73
SEMA4D-222ENST00000540183 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
SEMA4D-222ENST00000540183 TSPAN4O14817 238 aa10.52□□□□□ -0.73
SEMA4D-222ENST00000540183 PSMB9P28065 219 aa10.52□□□□□ -0.73
SEMA4D-222ENST00000540183 FGF9P31371 208 aaPredicted RBP10.52□□□□□ -0.73
SEMA4D-222ENST00000540183 TAS2R31P59538 309 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms