RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SLC25A46Q96AG3 418 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 EEF1AKMT3Q96AZ1 226 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 ARHGAP5-AS1Q96IT6 56 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 TSC22D3Q99576 134 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 SLIRPQ9GZT3 109 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 MAP6D1Q9H9H5 199 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 S4R3C0 116 aa8.58□□□□□ -1.04
CLSTN3-209ENST00000539982 MUC4Q99102 2169 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 TRBV6-7A0A0A0MS04 114 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 LINC00473A8K010 186 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 PDCD5O14737 125 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 CLEC3BP05452 202 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 CRYGCP07315 174 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 CLEC2LP0C7M8 214 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 RPL35AP18077 110 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 RAB3BP20337 219 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 PSMB6P28072 239 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 ELLP55199 621 aaPredicted RBP8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 IGSF11Q5DX21 431 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 CROCCP3Q8IVE0 287 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 GALNT14Q96FL9 552 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 PECRQ9BY49 303 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 SLC2A9Q9NRM0 540 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 FBXL17Q9UF56 701 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 RBM7Q9Y580 266 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
CLSTN3-209ENST00000539982 TRBV7-1A0A0A6YYK4 115 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 SMIM30A4D0T7 59 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 TSPAN4O14817 238 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 DIRAS3O95661 229 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 DHFRP00374 187 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 GSTT2P0CG29 244 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 GSTT2BP0CG30 244 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 HIST1H1BP16401 226 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 FCGR2BP31994 310 aaPredicted RBP8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 ODF3L2Q3SX64 289 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 OR6M1Q8NGM8 313 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 MCFD2Q8NI22 146 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 AP3S1Q92572 193 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 RARRES2Q99969 163 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 CABLES2Q9BTV7 478 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 NXF2Q9GZY0 626 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 UFC1Q9Y3C8 167 aa8.56□□□□□ -1.04
CLSTN3-209ENST00000539982 A0A075B6Q4 140 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 NOTOA8MTQ0 251 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 E7EUB6 86 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 ZNF735P0CB33 412 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 MYOD1P15172 320 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 PSMD7P51665 324 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 OR10A3P58181 314 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 PLAC9Q5JTB6 97 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 NR2C2APQ86WQ0 139 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 CXorf58Q96LI9 332 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 C11orf68Q9H3H3 251 aaKnown RBP8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 AK6Q9Y3D8 172 aaKnown RBP8.55□□□□□ -1.04
CLSTN3-209ENST00000539982 A0A1B0GW64 132 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 MPTX1A8MV57 137 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 IGLL5B9A064 214 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 FCGR3BO75015 233 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 TMEM127O75204 238 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 AREGP15514 252 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 MAS1LP35410 378 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 MRPS15P82914 257 aaKnown RBP8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 P2RY14Q15391 338 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 SFXN4Q6P4A7 337 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 OR56B1Q8NGI3 324 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 OR5B3Q8NH48 314 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 OR2A7Q96R45 310 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 ZNF436Q9C0F3 470 aaPredicted RBP8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 C6orf62Q9GZU0 229 aaPredicted RBP8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 V9GY05 133 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 DNAH6Q9C0G6 4158 aa8.54□□□□□ -1.04
CLSTN3-209ENST00000539982 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 IGHV3-35A0A0C4DH35 117 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 MFSD2BA6NFX1 497 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 OR4C46A6NHA9 309 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 IFITM5A6NNB3 132 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 XRCC3O43542 346 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 KBTBD11O94819 623 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 S1PR2O95136 353 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 FCGR3AP08637 254 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 DEFA4P12838 97 aa8.53□□□□□ -1.04
CLSTN3-209ENST00000539982 S100A5P33763 92 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms