RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 A0A1W2PPQ1 181 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF320A2RRD8 509 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR5B21A6NL26 309 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 GOSR1O95249 250 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1-39P01597 117 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1-5P01602 117 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1D-39P04432 117 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-204ENST00000539847 P0C879 139 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 CD1BP29016 333 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 BRS3P32247 399 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 CD69Q07108 199 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 TMEM267Q0VDI3 215 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 TOMM20LQ6UXN7 152 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 NUFIP2Q7Z417 695 aaKnown RBP6.38□□□□□ -1.39
CCDC60-204ENST00000539847 LINC01551Q86U37 167 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 CALHM1Q8IU99 346 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR4B1Q8NGF8 309 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR2D3Q8NGH3 330 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR4F5Q8NH21 305 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR2AE1Q8NHA4 323 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 DYRK2Q92630 601 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 OR4F4Q96R69 305 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 TBX15Q96SF7 602 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 ZDHHC11Q9H8X9 412 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-204ENST00000539847 AURKAIP1Q9NWT8 199 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-204ENST00000539847 KCNIP1Q9NZI2 227 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 MPC1Q9Y5U8 109 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 ARL2-SNX15V9GYD0 113 aa6.38□□□□□ -1.39
CCDC60-204ENST00000539847 STAB1Q9NY15 2570 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 TRAV39A0A0B4J263 110 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 A0A0J9YW62 118 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 C20orf202A1L168 122 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 FAM90A9PA6NNJ1 464 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF716A6NP11 495 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 PMS2P5A8MQ11 134 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF705FA8MVS1 300 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 G3V3Y1 287 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 RAB29O14966 203 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 SS18L1O75177 396 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 NXPH2O95156 264 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 MT-ND6P03923 174 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF705DP0CH99 300 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF705BP0CI00 300 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 PSG2P11465 335 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 BCL3P20749 454 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 MEOX1P50221 254 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 FGF8P55075 233 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 AARDQ4LEZ3 155 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 TPTE2P1Q5T6R2 138 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 AAED1Q7RTV5 226 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 FAM90A1Q86YD7 464 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 Q8IYB0 196 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZDHHC23Q8IYP9 409 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 FGFRL1Q8N441 504 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 OR10P1Q8NGE3 313 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 CMTM2Q8TAZ6 248 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 RPUSD4Q96CM3 377 aaKnown RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 RNF2Q99496 336 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ATG101Q9BSB4 218 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 OR2J1Q9GZK6 312 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 CBLN4Q9NTU7 201 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
CCDC60-204ENST00000539847 B4GALT7Q9UBV7 327 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 WIPI2Q9Y4P8 454 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF407Q9C0G0 2248 aa6.37□□□□□ -1.39
CCDC60-204ENST00000539847 C11orf94C9JXX5 98 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 ITGB1BP1O14713 200 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 WDR1O75083 606 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1D-33P01593 117 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 IGKV1-33P01594 117 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 IGHG3P01860 377 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 AMY1AP04745 511 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 IL6RP08887 468 aaPredicted RBP6.36□□□□□ -1.39
CCDC60-204ENST00000539847 OR10J4P0C629 311 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 IRF2P14316 349 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 AREGP15514 252 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 TUBG1P23258 451 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 NPPCP23582 126 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 G0S2P27469 103 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 SRD5A2P31213 254 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 CARD18P57730 90 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 RPP30P78346 268 aaKnown RBP6.36□□□□□ -1.39
CCDC60-204ENST00000539847 C19orf54Q5BKX5 351 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 DMRTC1Q5HYR2 192 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 SPANXN5Q5MJ07 72 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 FFAR4Q5NUL3 377 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 FBXW9Q5XUX1 488 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 CYB5R2Q6BCY4 276 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 ACSM6Q6P461 480 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 WDR73Q6P4I2 378 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
CCDC60-204ENST00000539847 ZNF705AQ6ZN79 300 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms