RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ABHD12Q8N2K0 398 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 GCSAMQ8N6F7 178 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 TPRX1Q8N7U7 411 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 SLC35E1Q96K37 410 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-209ENST00000539584 IL19Q9UHD0 177 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
UBE3B-209ENST00000539584 USF3Q68DE3 2245 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 A0A1W2PNU3 283 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-209ENST00000539584 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
UBE3B-209ENST00000539584 TDGF1P3P51864 188 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 LINC00205P59089 165 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 OR10J3Q5JRS4 329 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 Q8TCH9 128 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 NEUROG1Q92886 237 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 CDX2Q99626 313 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-209ENST00000539584 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 IL17BQ9UHF5 180 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 AQP7O14520 342 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 CECR9P0C854 216 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 EDDM3AQ14507 147 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 ARSJQ5FYB0 599 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-209ENST00000539584 PQLC2Q6ZP29 291 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 MMD2Q8IY49 270 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
UBE3B-209ENST00000539584 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
UBE3B-209ENST00000539584 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 FCN1O00602 326 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 NUPR1O60356 82 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 FABP6P51161 128 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 TAS2R45P59539 299 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 TCF23Q7RTU1 214 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 BAGE3Q86Y29 109 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 BAGE2Q86Y30 109 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 OR1L6Q8NGR2 347 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 C1orf159Q96HA4 380 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 TRIB1Q96RU8 372 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 MSL2Q9HCI7 577 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 PLSCR4Q9NRQ2 329 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 CBLN4Q9NTU7 201 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 PRUNE2Q8WUY3 3088 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 DNAJC13O75165 2243 aa10.93□□□□□ -0.66
UBE3B-209ENST00000539584 IGHV2OR16-5A0A0B4J2B6 119 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 HELTA6NFD8 242 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 K7EN84 100 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 REG1AP05451 166 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CGB3P0DN86 165 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CGB7P0DN87 165 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CBLN1P23435 193 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 KIR2DL2P43627 348 aaPredicted RBP10.92□□□□□ -0.66
UBE3B-209ENST00000539584 GNG4P50150 75 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CX3CL1P78423 397 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 TECRQ9NZ01 308 aaKnown RBP10.92□□□□□ -0.66
UBE3B-209ENST00000539584 DUSP13Q9UII6 198 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 TP53TG3Q9ULZ0 132 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 V9GYV3 84 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 ISLRO14498 428 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 MMP23AO75900 390 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 SERF1AO75920 110 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 OR5G3P0C626 314 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 BRS3P32247 399 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 GAGE1Q13065 139 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 TIGITQ495A1 244 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 RPL39P5Q59GN2 51 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 OR4A47Q6IF82 309 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 Q6ZWC4 215 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 CNEP1R1Q8N9A8 125 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 SSMEM1Q8WWF3 244 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 LOXL4Q96JB6 756 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 DCTN5Q9BTE1 182 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 PARD6AQ9NPB6 346 aa10.92□□□□□ -0.66
UBE3B-209ENST00000539584 WDR87Q6ZQQ6 2873 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
UBE3B-209ENST00000539584 BMP5P22003 454 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF134P52741 427 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 LTC4SQ16873 150 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 SIGLECL1Q8N7X8 197 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 OR4B1Q8NGF8 309 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 SARAFQ96BY9 339 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 RNF2Q99496 336 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 VAMP8Q9BV40 100 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 SAMD10Q9BYL1 202 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 GTF3C1Q12789 2109 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 PTPRBP23467 1997 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 TRAV3A0A0B4J244 114 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 A0A1W2PRE2 83 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 GRIFINA4D1Z8 144 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 AGFG2O95081 481 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 CA2P00918 260 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 VKORC1L1Q8N0U8 176 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms