RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 COTL1Q14019 142 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 DNLZQ5SXM8 178 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 SH3BGRL3Q9H299 93 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
LSAMP-207ENST00000539563 VENTXO95231 258 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 PLAUP00749 431 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 CA7P43166 264 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 NHLRC3Q5JS37 347 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 DPM3Q9P2X0 92 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF256Q9Y2P7 627 aaPredicted RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 GCHFRP30047 84 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 LY6EQ16553 131 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 A0A0B4J293 547 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 HAX1O00165 279 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 NUTF2P61970 127 aaKnown RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 HIST1H4GQ99525 98 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 DNAJC13O75165 2243 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 FBLL1A6NHQ2 334 aaKnown RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 F12P00748 615 aaPredicted RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 H2BFSP57053 126 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 PRSS8Q16651 343 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 GPR61Q9BZJ8 451 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 VKORC1L1Q8N0U8 176 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 C2orf88Q9BSF0 95 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 TLNRD1Q9H1K6 362 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 IGHV3OR16-12A0A075B7B8 117 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 PF4P02776 101 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 C2orf83Q53S99 150 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 CACNG8Q8WXS5 425 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 LTBP1Q14766 1721 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 IGKV3D-11A0A0A0MRZ8 115 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 TRGV3P03979 118 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 CECR9P0C854 216 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 FABP2P12104 132 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 CRYBA2P53672 197 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 RSPO4Q2I0M5 234 aaPredicted RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 ATP1A1-AS1Q5TC04 95 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 RARRES2Q99969 163 aa5.5□□□□□ -1.53
LSAMP-207ENST00000539563 TCF20Q9UGU0 1960 aaKnown RBP5.5□□□□□ -1.53
LSAMP-207ENST00000539563 IGKV3D-15A0A087WSY6 115 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 TMEM250H0YL14 139 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 H7C1H1 209 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IGKV3-15P01624 115 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 LINC00114Q6XXX2 140 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 RNASE6Q93091 150 aaKnown RBP5.49□□□□□ -1.53
LSAMP-207ENST00000539563 REPIN1Q9BWE0 567 aaKnown RBP5.49□□□□□ -1.53
LSAMP-207ENST00000539563 RTN4RQ9BZR6 473 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
LSAMP-207ENST00000539563 FMC1Q96HJ9 113 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IMMP1LQ96LU5 166 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 ZNHIT1O43257 154 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IGHV1-2P23083 117 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 C2orf68Q2NKX9 166 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 CENPWQ5EE01 88 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 OR4A47Q6IF82 309 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 GOLT1AQ6ZVE7 132 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 HTTP42858 3142 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IGLV3-12A0A075B6K2 115 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 HBBP68871 147 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF56Q15929 161 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 WDYHV1Q96HA8 205 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 SGK494Q96LW2 274 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 KBTBD11-OT1A0A1B0GTJ5 212 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 C1QL1O75973 258 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 KLK2P20151 261 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 PUSL1Q8N0Z8 303 aaKnown RBP5.49□□□□□ -1.53
LSAMP-207ENST00000539563 TMEM101Q96IK0 257 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 GPHA2Q96T91 129 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IL4P05112 153 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 RFPL3SP0C7P2 107 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 ZNF708P17019 499 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 FAM209BQ5JX69 171 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 FAM168AQ92567 244 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 NBEAP1P0C6P0 100 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 BSPH1Q075Z2 132 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 PSMG4Q5JS54 123 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 MARVELD3Q96A59 401 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 NEU1Q99519 415 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IFI27L2Q9H2X8 130 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 LINC00312Q9Y6C7 94 aa5.49□□□□□ -1.53
LSAMP-207ENST00000539563 IGHV2OR16-5A0A0B4J2B6 119 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LOC107984156A0A0G2JMH3 177 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 PQLC2LA1A4F0 135 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 GAGE10A6NGK3 116 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 K7ERU9 68 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 UCP1P25874 307 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 TMEM136Q6ZRR5 245 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 ARL17AQ8IVW1 177 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 LINC01560Q8TB33 94 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 BRCA2P51587 3418 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 TRAV9-1A0A075B6T8 112 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 YPEL1O60688 119 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 UQCRFS1P47985 274 aa5.48□□□□□ -1.53
LSAMP-207ENST00000539563 PEAR1Q5VY43 1037 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms