RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 SSX3Q99909 188 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
VAMP1-207ENST00000539047 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 HIPK2Q9H2X6 1198 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 TMEM14BQ9NUH8 114 aa12.36□□□□□ -0.43
VAMP1-207ENST00000539047 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
VAMP1-207ENST00000539047 CD24P25063 80 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 PAX6P26367 422 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 RIPPLY3P57055 190 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
VAMP1-207ENST00000539047 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 PPP1R27Q86WC6 154 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 NPBQ8NG41 125 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 HINT2Q9BX68 163 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 RBKSQ9H477 322 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 PLEKHA3Q9HB20 300 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 SIGLEC9Q9Y336 463 aa12.35□□□□□ -0.43
VAMP1-207ENST00000539047 A0A1W2PN81 502 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 NDUFA3O95167 84 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 LYL1P12980 280 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 CHRNA7P36544 502 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 P2RY1P47900 373 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 CAV2P51636 162 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 TAS2R30P59541 319 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 GNB1P62873 340 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 TNXAQ16473 311 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 PRSS8Q16651 343 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 Q5BKY6 102 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 FAM120AOSQ5T036 256 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 Q8N6K4 173 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 GRPEL2Q8TAA5 225 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 FBXL15Q9H469 300 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-207ENST00000539047 OR5AC2Q9NZP5 309 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 MOB4Q9Y3A3 225 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 WSB1Q9Y6I7 421 aa12.34□□□□□ -0.43
VAMP1-207ENST00000539047 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 G3V3Q6 166 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 H3BUX3 64 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 CHST1O43916 411 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 OR2F2O95006 317 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-207ENST00000539047 IAPPP10997 89 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 CNTFRP26992 372 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 OR2F1Q13607 317 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-207ENST00000539047 ACOT7LQ6ZUV0 252 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 STX12Q86Y82 276 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 SLC25A33Q9BSK2 321 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-207ENST00000539047 PSENENQ9NZ42 101 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 TNFSF18Q9UNG2 199 aa12.33□□□□□ -0.44
VAMP1-207ENST00000539047 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-207ENST00000539047 A0A0D9SG52 128 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 M0QZK8 103 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 TSC22D2O75157 780 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 CNIH1O95406 144 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 CRYGBP07316 175 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 CD99P14209 185 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 FOSL1P15407 271 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
VAMP1-207ENST00000539047 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-207ENST00000539047 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 ZNF345Q14585 488 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 DEFB112Q30KQ8 113 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
VAMP1-207ENST00000539047 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 RITA1Q96K30 269 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 LYRM2Q9NU23 88 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-207ENST00000539047 TMEM160Q9NX00 188 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 HSPB11Q9Y547 144 aa12.32□□□□□ -0.44
VAMP1-207ENST00000539047 H0YIZ8 118 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 RPL12P30050 165 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 ERHP84090 104 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 KRTAP1-1Q07627 177 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 SPINK9Q5DT21 86 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 ABHD5Q8WTS1 349 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 C22orf15Q8WYQ4 148 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 RNF126Q9BV68 326 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 TPSG1Q9NRR2 321 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms