RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TNFRSF18Q9Y5U5 241 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 NPFFR1Q9GZQ6 430 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 MRPS18CQ9Y3D5 142 aaKnown RBP14.23□□□□□ -0.13
SCARB1-205ENST00000538291 POLR2AP24928 1970 aaKnown RBP14.23□□□□□ -0.13
SCARB1-205ENST00000538291 NPIPB9F8W1W9 429 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 NPIPB7O75200 414 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 DNLZQ5SXM8 178 aa14.23□□□□□ -0.13
SCARB1-205ENST00000538291 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 RRHO14718 337 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 CDKN1AP38936 164 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 HIST1H2BAQ96A08 127 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 GPR61Q9BZJ8 451 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 PEMTQ9UBM1 199 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 A0A0G2JMM0 328 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 A0A1W2PPB8 328 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 A0A1W2PRS3 328 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 PSMB11A5LHX3 300 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 KIR3DP1A8MWS1 328 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 C9orf106Q8NAJ2 232 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 FBLIM1Q8WUP2 373 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 WDYHV1Q96HA8 205 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 FOXA2Q9Y261 457 aaPredicted RBP14.22□□□□□ -0.13
SCARB1-205ENST00000538291 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
SCARB1-205ENST00000538291 TRGC2P03986 189 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 ASIPP42127 132 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 MRPL14Q6P1L8 145 aaKnown RBP14.22□□□□□ -0.13
SCARB1-205ENST00000538291 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 GPR183P32249 361 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 PSG7Q13046 419 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 DUX3Q96PT4 197 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 TDRD15B5MCY1 1934 aaKnown RBP14.22□□□□□ -0.13
SCARB1-205ENST00000538291 NMBP08949 121 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 C1QTNF5Q9BXJ0 243 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 LINC00312Q9Y6C7 94 aa14.22□□□□□ -0.13
SCARB1-205ENST00000538291 H0YL77 283 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 IL6RP08887 468 aaPredicted RBP14.21□□□□□ -0.13
SCARB1-205ENST00000538291 RND3P61587 244 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 OR4D5Q8NGN0 318 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 SRIP30626 198 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 C2orf68Q2NKX9 166 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 OR13A1Q8NGR1 328 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 PSMG3Q9BT73 122 aaPredicted RBP14.21□□□□□ -0.13
SCARB1-205ENST00000538291 S4R3C0 116 aa14.21□□□□□ -0.13
SCARB1-205ENST00000538291 ZXDCQ2QGD7 858 aaPredicted RBP14.21□□□□□ -0.14
SCARB1-205ENST00000538291 ABLIM2Q6H8Q1 611 aa14.21□□□□□ -0.14
SCARB1-205ENST00000538291 XIRP1Q702N8 1843 aaKnown RBP14.21□□□□□ -0.14
SCARB1-205ENST00000538291 A0A1W2PRX2 142 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 FABP2P12104 132 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 OR4A47Q6IF82 309 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 CBLN4Q9NTU7 201 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 FOLR2P14207 255 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 IFITM3Q01628 133 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 TEX45Q8NA69 505 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 GGACTQ9BVM4 153 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 MIA3Q5JRA6 1907 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 EIF3GO75821 320 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCARB1-205ENST00000538291 SPATA45Q537H7 98 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 OR13C6PQ8NH95 151 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 SH3BGRL3Q9H299 93 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 COL5A1-AS1Q5SY13 56 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 ALKBH7Q9BT30 221 aaPredicted RBP14.2□□□□□ -0.14
SCARB1-205ENST00000538291 DOCK5Q9H7D0 1870 aa14.2□□□□□ -0.14
SCARB1-205ENST00000538291 LOC102724200A0A096LPH7 203 aaPredicted RBP14.19□□□□□ -0.14
SCARB1-205ENST00000538291 TRAV24A0A0B4J272 114 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 IQCF6A8MYZ5 107 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 HLA-DRB1P01911 266 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 CLEC19AQ6UXS0 136 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 VWCEQ96DN2 955 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 PARLQ9H300 379 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 JOSD1Q15040 202 aaPredicted RBP14.19□□□□□ -0.14
SCARB1-205ENST00000538291 ZDBF2Q9HCK1 2354 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 TRBV9A0A0B4J1U6 114 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 C7orf71A4D174 169 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 M0R381 172 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 UMODP07911 640 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 SAMD13Q5VXD3 122 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 OR10S1Q8NGN2 331 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 RARRES2Q99969 163 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 REPIN1Q9BWE0 567 aaKnown RBP14.19□□□□□ -0.14
SCARB1-205ENST00000538291 TM2D1Q9BX74 207 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 SEMA5BQ9P283 1151 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 GPX4P36969 197 aaPredicted RBP14.19□□□□□ -0.14
SCARB1-205ENST00000538291 CENPWQ5EE01 88 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 OR1P1Q8NH06 330 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 MRPL20Q9BYC9 149 aaKnown RBP14.19□□□□□ -0.14
SCARB1-205ENST00000538291 DANCRP0C864 163 aa14.19□□□□□ -0.14
SCARB1-205ENST00000538291 PRSS22Q9GZN4 317 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 HINT1P49773 126 aaPredicted RBP14.18□□□□□ -0.14
SCARB1-205ENST00000538291 C1QL2Q7Z5L3 287 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 MYOD1P15172 320 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 HTN3P15516 51 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 HBBP68871 147 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 LINC01587Q99440 93 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 CCDC88CQ9P219 2028 aa14.18□□□□□ -0.14
SCARB1-205ENST00000538291 VDAC2P45880 294 aaPredicted RBP14.17□□□□□ -0.14
SCARB1-205ENST00000538291 COLCA1Q6ZS62 124 aa14.17□□□□□ -0.14
SCARB1-205ENST00000538291 SFRP2Q96HF1 295 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms