RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 OR2J3O76001 311 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 PRH1P02810 166 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 DEFA4P12838 97 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 CTRB1P17538 263 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 ELK1P19419 428 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 HLA-DMAP28067 261 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 CTRB2Q6GPI1 263 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 C11orf87Q6NUJ2 197 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 DGCR14Q96DF8 476 aaKnown RBP16.4■□□□□ 0.22
CCDC78-215ENST00000538176 THYN1Q9P016 225 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 FBXL7Q9UJT9 491 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 COL7A1Q02388 2944 aa16.4■□□□□ 0.22
CCDC78-215ENST00000538176 FAM25AB3EWG3 89 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 FAM25CB3EWG5 89 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 FAM25GB3EWG6 89 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 E7EUB6 86 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 HPGDSO60760 199 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 SNX29P2Q8IUI4 249 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 OR2K2Q8NGT1 345 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 CXorf58Q96LI9 332 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 TMEM140Q9NV12 185 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 U3KQK5 164 aa16.39■□□□□ 0.21
CCDC78-215ENST00000538176 GGCTO75223 188 aaKnown RBP16.38■□□□□ 0.21
CCDC78-215ENST00000538176 TRBV12-3P01733 135 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 RLN1P04808 185 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 SMIM18P0DKX4 95 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 UCP3P55916 312 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 OR2B8PP59922 312 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 DEFA5Q01523 94 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 GPR107Q5VW38 600 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 LCN12Q6JVE5 192 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 IL34Q6ZMJ4 242 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 GPR141Q7Z602 305 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 EEF1AKMT3Q96AZ1 226 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 FKBP11Q9NYL4 201 aa16.38■□□□□ 0.21
CCDC78-215ENST00000538176 TRBV7-1A0A0A6YYK4 115 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 MARCH11A6NNE9 402 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 BMPR1BO00238 502 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 S1PR2O95136 353 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 CSN3P07498 182 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 Q8N402 240 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 FANCD2OSQ96PS1 177 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 TSC22D3Q99576 134 aa16.37■□□□□ 0.21
CCDC78-215ENST00000538176 QTRT1Q9BXR0 403 aaKnown RBP16.37■□□□□ 0.21
CCDC78-215ENST00000538176 A0A1B0GW64 132 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 A8MZ25 164 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 SNAPC5O75971 98 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 IFNA6P05013 189 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 AREGP15514 252 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 LPAR6P43657 344 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 GPHB5Q86YW7 130 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 SLC38A6Q8IZM9 456 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 OR1L8Q8NGR8 309 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 FCAMRQ8WWV6 532 aa16.36■□□□□ 0.21
CCDC78-215ENST00000538176 LGALS9O00182 355 aa16.35■□□□□ 0.21
CCDC78-215ENST00000538176 TRAPPC2P0DI81 140 aa16.35■□□□□ 0.21
CCDC78-215ENST00000538176 TRAPPC2BP0DI82 140 aa16.35■□□□□ 0.21
CCDC78-215ENST00000538176 TBPP20226 339 aa16.35■□□□□ 0.21
CCDC78-215ENST00000538176 SGPP2Q8IWX5 399 aa16.35■□□□□ 0.21
CCDC78-215ENST00000538176 NAA50Q9GZZ1 169 aaKnown RBP16.35■□□□□ 0.21
CCDC78-215ENST00000538176 IGLV11-55A0A075B6I3 123 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 CGB1A6NKQ9 187 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 NDUFB8O95169 186 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 KRASP01116 189 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 ALDH3B2P48448 385 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 FAM106AQ4KMX7 169 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 ZNF486Q96H40 463 aaPredicted RBP16.34■□□□□ 0.21
CCDC78-215ENST00000538176 FXYD6Q9H0Q3 95 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 EXTL2Q9UBQ6 330 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 PRNDQ9UKY0 176 aa16.34■□□□□ 0.21
CCDC78-215ENST00000538176 TRAV3A0A0B4J244 114 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 IGLC7A0M8Q6 106 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 PTBP1P26599 531 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC78-215ENST00000538176 ARL3P36405 182 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 MECP2P51608 486 aaKnown RBP16.33■□□□□ 0.2
CCDC78-215ENST00000538176 ZNF585BQ52M93 769 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 GTSCR1Q86UQ5 136 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 LAX1Q8IWV1 398 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 ARRDC1Q8N5I2 433 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 OR1L6Q8NGR2 347 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 OR5B3Q8NH48 314 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 TMEM56Q96MV1 263 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 BCL7BQ9BQE9 202 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 RABL2AQ9UBK7 228 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-215ENST00000538176 RABL2BQ9UNT1 228 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.2
CCDC78-215ENST00000538176 TEX50A0A1B0GTY4 177 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 FRMD6-AS1P0C7T7 363 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
CCDC78-215ENST00000538176 SSBP1Q04837 148 aaKnown RBP16.32■□□□□ 0.2
CCDC78-215ENST00000538176 RNASE10Q5GAN6 216 aaKnown RBP16.32■□□□□ 0.2
CCDC78-215ENST00000538176 CLEC19AQ6UXS0 136 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 Q8N1Y9 231 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 LSM10Q969L4 123 aaKnown RBP16.32■□□□□ 0.2
CCDC78-215ENST00000538176 ASCL2Q99929 193 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 ZMAT4Q9H898 229 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 NDUFA4L2Q9NRX3 87 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 TECRQ9NZ01 308 aaKnown RBP16.32■□□□□ 0.2
CCDC78-215ENST00000538176 MTFP1Q9UDX5 166 aa16.32■□□□□ 0.2
CCDC78-215ENST00000538176 OR2C1O95371 312 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms