RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 NRARPQ7Z6K4 114 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 ADAD2Q8NCV1 583 aaKnown RBP13.97□□□□□ -0.17
CCDC61-201ENST00000536603 SRSF12Q8WXF0 261 aaKnown RBP13.97□□□□□ -0.17
CCDC61-201ENST00000536603 UBE2E2Q96LR5 201 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 PHB2Q99623 299 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 AIFM2Q9BRQ8 373 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 PALMDQ9NP74 551 aa13.97□□□□□ -0.17
CCDC61-201ENST00000536603 S1PR2O95136 353 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 CTSDP07339 412 aaPredicted RBP13.96□□□□□ -0.17
CCDC61-201ENST00000536603 NQO2P16083 231 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 F2RP25116 425 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 MYCNOSP40205 109 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 TAS2R31P59538 309 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 CD69Q07108 199 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 ASPHD1Q5U4P2 390 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 OR4A47Q6IF82 309 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 MRPL41Q8IXM3 137 aaKnown RBP13.96□□□□□ -0.17
CCDC61-201ENST00000536603 TMEM167AQ8TBQ9 72 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 TMEM230Q96A57 120 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.17
CCDC61-201ENST00000536603 TMEM68Q96MH6 324 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 PLEKHA2Q9HB19 425 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 ZNF355PQ9NSJ1 428 aa13.96□□□□□ -0.17
CCDC61-201ENST00000536603 CCL24O00175 119 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 LPAR6P43657 344 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 RBMS2Q15434 407 aaKnown RBP13.95□□□□□ -0.18
CCDC61-201ENST00000536603 SURF2Q15527 256 aaPredicted RBP13.95□□□□□ -0.18
CCDC61-201ENST00000536603 C10orf55Q5SWW7 151 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 MZT2BQ6NZ67 158 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 TBC1D26Q86UD7 250 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 C4orf3Q8WVX3 66 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 RAX2Q96IS3 184 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 OR5B12Q96R08 314 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 P2RX4Q99571 388 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 SLC25A21Q9BQT8 299 aaPredicted RBP13.95□□□□□ -0.18
CCDC61-201ENST00000536603 SLC2A9Q9NRM0 540 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 BET1LQ9NYM9 111 aa13.95□□□□□ -0.18
CCDC61-201ENST00000536603 FAM240BA0A1B0GVZ2 78 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 WI2-2373I1.2A0A1W2PRP0 233 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 MPPED1O15442 326 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
CCDC61-201ENST00000536603 TCRBP04435 133 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 RPA2P15927 270 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 ECI1P42126 302 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 PIGPP57054 158 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 TPPP2P59282 170 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 DEFA1P59665 94 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 DEFA3P59666 94 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 RND3P61587 244 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
CCDC61-201ENST00000536603 ZNF585BQ52M93 769 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 LINC00482Q8N8I6 264 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 DMBX1Q8NFW5 382 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 ZFAND1Q8TCF1 268 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 DPF1Q92782 380 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 COMMD9Q9P000 198 aa13.94□□□□□ -0.18
CCDC61-201ENST00000536603 TRAV3A0A0B4J244 114 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 TRGV3P03979 118 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 MAS1LP35410 378 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 POU2AF1Q16633 256 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 DUSP18Q8NEJ0 188 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 OR11H1Q8NG94 326 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 OR4A5Q8NH83 315 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 ZNF486Q96H40 463 aaPredicted RBP13.93□□□□□ -0.18
CCDC61-201ENST00000536603 SPIN2AQ99865 258 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 SPIN2BQ9BPZ2 258 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 SLA2Q9H6Q3 261 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 TMEM140Q9NV12 185 aa13.93□□□□□ -0.18
CCDC61-201ENST00000536603 TRAV6A0A075B6T7 132 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 E7EUB6 86 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 I3L521 148 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 UPK2O00526 184 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 KRASP01116 189 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 IL6RP08887 468 aaPredicted RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 ANXA7P20073 488 aaKnown RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 RPL27AP46776 148 aaKnown RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 RAB25P57735 213 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 ERVK-16P61578 105 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 TMED4Q7Z7H5 227 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 ENKURQ8TC29 256 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 WWC2-AS2Q96NR7 200 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 ALX4Q9H161 411 aaPredicted RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 C20orf85Q9H1P6 137 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 NUDT15Q9NV35 164 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
CCDC61-201ENST00000536603 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
CCDC61-201ENST00000536603 HMX3A6NHT5 357 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 H3BUA1 57 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 IGHV3-11P01762 117 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 MYOD1P15172 320 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 HLA-GP17693 338 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 G6PCP35575 357 aa13.91□□□□□ -0.18
CCDC61-201ENST00000536603 SUPT4H1P63272 117 aaKnown RBP13.91□□□□□ -0.18
CCDC61-201ENST00000536603 RUNX1Q01196 453 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms