RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TPPP2P59282 170 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF818PQ6ZRF7 136 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 OR4A5Q8NH83 315 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 CD300LFQ8TDQ1 290 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 SECTM1Q8WVN6 248 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 TCTEX1D2Q8WW35 142 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 MS4A10Q96PG2 267 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 OR2A7Q96R45 310 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 SLC5A7Q9GZV3 580 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 IFT46Q9NQC8 304 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 BET1LQ9NYM9 111 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 TAS2R8Q9NYW2 309 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 COPZ2Q9P299 210 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 STARD9Q9P2P6 4700 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 A0A087WW49 117 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 OVOL1O14753 267 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 HPRT1P00492 218 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 RFX2P48378 723 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 TAS2R31P59538 309 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 CATR1Q13166 79 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 ACSM6Q6P461 480 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 IDO2Q6ZQW0 420 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 NRARPQ7Z6K4 114 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF429Q86V71 674 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 OR5T1Q8NG75 326 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 ENKURQ8TC29 256 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 CASTOR1Q8WTX7 329 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-207ENST00000536483 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-207ENST00000536483 PLEKHA2Q9HB19 425 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 RANGRFQ9HD47 186 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-207ENST00000536483 FAM212BQ9NTI7 297 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-207ENST00000536483 GAR1Q9NY12 217 aaKnown RBP9.55□□□□□ -0.88
PRKDC-207ENST00000536483 EHFQ9NZC4 300 aa9.55□□□□□ -0.88
PRKDC-207ENST00000536483 TEX22C9J3V5 150 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 PLA2G10O15496 165 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 LYRM1O43325 122 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 SAP30O75446 220 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 CRYGCP07315 174 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF735P0CB33 412 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 SPNP16150 400 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 AP3S2P59780 193 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 TNXAQ16473 311 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 SLC25A42Q86VD7 318 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 OR5H2Q8NGV7 314 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 OR6F1Q8NGZ6 308 aa9.54□□□□□ -0.88
PRKDC-207ENST00000536483 THAP7Q9BT49 309 aaPredicted RBP9.54□□□□□ -0.88
PRKDC-207ENST00000536483 DNAH1Q9P2D7 4330 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 C13orf42A0A1B0GVH6 325 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 MEIS3P1A6NDR6 274 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 NAP1L6A6NFF2 107 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 FAM223BA6NKX1 122 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 NPIPB5A8MRT5 1133 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 RBMXL2O75526 392 aaKnown RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 PGLYRP1O75594 196 aaPredicted RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 ACTL6BO94805 426 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 LYL1P12980 280 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 GP9P14770 177 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 NQO2P16083 231 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 ZP3P21754 424 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 HLA-DMAP28067 261 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 RCVRNP35243 200 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 SLURP1P55000 103 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 UCP3P55916 312 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 HERV-K104P61576 105 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 RPL8P62917 257 aaKnown RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 KLF5Q13887 457 aaPredicted RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 LPCAT3Q6P1A2 487 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 FAM223AQ8IWN6 122 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 GPHA2Q96T91 129 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF2Q9BSG1 426 aaPredicted RBP9.53□□□□□ -0.88
PRKDC-207ENST00000536483 MARVELD1Q9BSK0 173 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 COMMD9Q9P000 198 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF257Q9Y2Q1 563 aa9.53□□□□□ -0.88
PRKDC-207ENST00000536483 A0A1B0GW64 132 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 HMX3A6NHT5 357 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 E7EUB6 86 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 IGHV3-11P01762 117 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 PMP2P02689 132 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 F2RP25116 425 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 HRH1P35367 487 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 FXYD4P59646 89 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 SSBP1Q04837 148 aaKnown RBP9.52□□□□□ -0.89
PRKDC-207ENST00000536483 OR2B11Q5JQS5 317 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 OR4A47Q6IF82 309 aa9.52□□□□□ -0.89
PRKDC-207ENST00000536483 NECAP1Q8NC96 275 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms