RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PSG3Q16557 428 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C3AR1Q16581 482 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 PIGYQ3MUY2 71 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 ZNF658BQ4V348 819 aaPredicted RBP3.12□□□□□ -1.91
MCF2-210ENST00000536274 ABHD17BQ5VST6 288 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 CRIP3Q6Q6R5 217 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C2orf91Q6ZV80 131 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 MMD2Q8IY49 270 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 ZNF525Q8N782 197 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR10G9Q8NGN4 311 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR10G7Q8NGN6 311 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR1L1Q8NH94 360 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 C5orf30Q96GV9 206 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 OR1A1Q9P1Q5 309 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 FBLN5Q9UBX5 448 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 TMEM14AQ9Y6G1 99 aa3.12□□□□□ -1.91
MCF2-210ENST00000536274 RP1P56715 2156 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TRBV20-1A0A075B6N2 111 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 IGKV1D-13A0A0B4J2D9 117 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 VWC2LB2RUY7 222 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TNFSF15O95150 251 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 GPR75O95800 540 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 NUDT14O95848 222 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 IFNA1P01562 189 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 IGKV1-13P0DP09 117 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 FXYD7P58549 80 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 DPTQ07507 201 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 Q0VG73 95 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 FHL3Q13643 280 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 ZNF818PQ6ZRF7 136 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 YRDCQ86U90 279 aaKnown RBP3.11□□□□□ -1.91
MCF2-210ENST00000536274 GAPTQ8N292 157 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 FAM168AQ92567 244 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TTTY13Q9BZ97 58 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 LINC00470Q9BZP3 86 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 MTCH1Q9NZJ7 389 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 ANAPC10Q9UM13 185 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 COL27A1Q8IZC6 1860 aaPredicted RBP3.11□□□□□ -1.91
MCF2-210ENST00000536274 ZFHX4Q86UP3 3567 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 IGLV1-36A0A0B4J1U3 117 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 PRSS37A4D1T9 235 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 C9orf118A6NHY6 69 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 MPPED1O15442 326 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 CRYGCP07315 174 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 SPINK8P0C7L1 97 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 PEBP1P30086 187 aaKnown RBP3.11□□□□□ -1.91
MCF2-210ENST00000536274 LGALS4P56470 323 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 CR1LQ2VPA4 569 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TIGITQ495A1 244 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 FHL5Q5TD97 284 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 CA13Q8N1Q1 262 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 C18orf32Q8TCD1 76 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 NDFIP1Q9BT67 221 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 ARRDC1-AS1Q9H2J1 176 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 CCL28Q9NRJ3 127 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 TMEM140Q9NV12 185 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 OR1A2Q9Y585 309 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 GVINP1Q7Z2Y8 2422 aa3.11□□□□□ -1.91
MCF2-210ENST00000536274 KBTBD11-OT1A0A1B0GTJ5 212 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 C17orf112F2Z3M2 114 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 RRHO14718 337 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 ASAH2BP0C7U1 165 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 PVRP15151 417 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 ZNF823P16415 610 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 PTGDSP41222 190 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 ARL4DP49703 201 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 CAMPP49913 170 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 HIST1H1AQ02539 215 aaPredicted RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 MFAP5Q13361 173 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 KISS1Q15726 138 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 TMEM97Q5BJF2 176 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 GDF5OSQ5U4N7 250 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 LYSMD4Q5XG99 296 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 TMEM215Q68D42 235 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 C20orf204Q6ZNR8 217 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 C1orf229Q6ZS94 237 aaPredicted RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 TMEM251Q8N6I4 163 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 TPRX1Q8N7U7 411 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 OSR1Q8TAX0 266 aaPredicted RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 KIR2DL4Q99706 377 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 RPP25Q9BUL9 199 aaKnown RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 SFXN3Q9BWM7 321 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 COMMD5Q9GZQ3 224 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 ST20Q9HBF5 79 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 FAM206AQ9NX38 181 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 PSENENQ9NZ42 101 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 JPT1Q9UK76 154 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 C19orf53Q9UNZ5 99 aaPredicted RBP3.1□□□□□ -1.91
MCF2-210ENST00000536274 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 HELTA6NFD8 242 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 H3BMG7 143 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 CDIPTO14735 213 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 RER1O15258 196 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 TUSC2O75896 110 aa3.1□□□□□ -1.91
MCF2-210ENST00000536274 NCR2O95944 276 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms