RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 TNFSF18Q9UNG2 199 aa8.63□□□□□ -1.03
UBE3B-205ENST00000535900 HSPB11Q9Y547 144 aa8.63□□□□□ -1.03
UBE3B-205ENST00000535900 POMT1Q9Y6A1 747 aa8.63□□□□□ -1.03
UBE3B-205ENST00000535900 TNCP24821 2201 aa8.63□□□□□ -1.03
UBE3B-205ENST00000535900 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
UBE3B-205ENST00000535900 FXYD6-FXYD2A0A087WZ82 144 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 E5RGE8 158 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 M0QZK8 103 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 DEDDO75618 318 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 IL6RP08887 468 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 PVALBP20472 110 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 MDKP21741 143 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 MAS1LP35410 378 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 G6PCP35575 357 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 NKX2-1P43699 371 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 NKX2-5P52952 324 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 LGALSLQ3ZCW2 172 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 RUSC1-AS1Q66K80 236 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 TREML4Q6UXN2 200 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 ZNF429Q86V71 674 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 PUSL1Q8N0Z8 303 aaKnown RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 FAM71E2Q8N5Q1 922 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 Q8N6K4 173 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 INO80EQ8NBZ0 244 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 OR52E5Q8NH55 327 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 TMEM167AQ8TBQ9 72 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 C17orf50Q8WW18 174 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 TAF15Q92804 592 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 EAF1Q96JC9 268 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 AQP10Q96PS8 301 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 RNF126Q9BV68 326 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 SLA2Q9H6Q3 261 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 TNFRSF19Q9NS68 423 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 GSKIPQ9P0R6 139 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 KIAA1456Q9P272 454 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 NSG2Q9Y328 171 aa8.62□□□□□ -1.03
UBE3B-205ENST00000535900 SOX21Q9Y651 276 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-205ENST00000535900 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 L7N2F9 121 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 NBR2O15453 112 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 ARPC5O15511 151 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 KCNAB3O43448 404 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 MED6O75586 246 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 KBTBD11O94819 623 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 NDUFA3O95167 84 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-205ENST00000535900 CRYBA1P05813 215 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 SNRNP70P08621 437 aaKnown RBP8.61□□□□□ -1.03
UBE3B-205ENST00000535900 TMEM11P17152 192 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 S100A11P31949 105 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 RAB32Q13637 225 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 HES1Q14469 280 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 PDLIM3Q53GG5 364 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-205ENST00000535900 OR4A47Q6IF82 309 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 MMD2Q8IY49 270 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 TMEM86BQ8N661 226 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 OR5B3Q8NH48 314 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 OR4A16Q8NH70 328 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 RAB40CQ96S21 281 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 SSX3Q99909 188 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 MFFQ9GZY8 342 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 MBD2Q9UBB5 411 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 FOXA2Q9Y261 457 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-205ENST00000535900 ZNF257Q9Y2Q1 563 aa8.61□□□□□ -1.03
UBE3B-205ENST00000535900 FAM181BA6NEQ2 426 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 SRRM4A7MD48 611 aaKnown RBP8.6□□□□□ -1.03
UBE3B-205ENST00000535900 H0YIZ8 118 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 K7EPK0 472 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 UPK2O00526 184 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 RRHO14718 337 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 RGS13O14921 159 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 FGF16O43320 207 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 SCAF4O95104 1147 aaKnown RBP8.6□□□□□ -1.03
UBE3B-205ENST00000535900 SAA1P0DJI8 122 aaPredicted RBP8.6□□□□□ -1.03
UBE3B-205ENST00000535900 P2RY1P47900 373 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 TAS2R30P59541 319 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 RPL8P62917 257 aaKnown RBP8.6□□□□□ -1.03
UBE3B-205ENST00000535900 PSG5Q15238 335 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 MMDQ15546 238 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 MRPL41Q8IXM3 137 aaKnown RBP8.6□□□□□ -1.03
UBE3B-205ENST00000535900 OR4F5Q8NH21 305 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 OR1S1Q8NH92 325 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 SSMEM1Q8WWF3 244 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
UBE3B-205ENST00000535900 A0A1B0GUS0 222 aa8.59□□□□□ -1.03
UBE3B-205ENST00000535900 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
UBE3B-205ENST00000535900 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms