RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 OR51H1Q8NH63 302 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 OR2AE1Q8NHA4 323 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 KCNS1Q96KK3 526 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 YPEL2Q96QA6 119 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 RASL10BQ96S79 203 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 SF3B5Q9BWJ5 86 aaKnown RBP5.49□□□□□ -1.53
USP28-202ENST00000535607 QTRT1Q9BXR0 403 aaKnown RBP5.49□□□□□ -1.53
USP28-202ENST00000535607 CCL28Q9NRJ3 127 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 C19orf25Q9UFG5 118 aaPredicted RBP5.49□□□□□ -1.53
USP28-202ENST00000535607 TBL2Q9Y4P3 447 aaKnown RBP5.49□□□□□ -1.53
USP28-202ENST00000535607 RFNGQ9Y644 331 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 ARL2-SNX15V9GYD0 113 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 GVINP1Q7Z2Y8 2422 aa5.49□□□□□ -1.53
USP28-202ENST00000535607 ASCC3Q8N3C0 2202 aaKnown RBP5.48□□□□□ -1.53
USP28-202ENST00000535607 SPEGQ15772 3267 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RP1P56715 2156 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 DPRXA6NFQ7 191 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 C9JCJ5 164 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RRHO14718 337 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 SERF1AO75920 110 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 S1PR2O95136 353 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 HLA-DQA1P01909 254 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 GPX1P07203 203 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 IGLC2P0DOY2 106 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 IAPPP10997 89 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 SELEP16581 610 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 TIMP3P35625 211 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 WNT5AP41221 380 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 PRRX1P54821 245 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RBX1P62877 108 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 VAMP3Q15836 100 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RTL8BQ17RB0 113 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 AARDQ4LEZ3 155 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 DCAF12Q5T6F0 453 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RASL11AQ6T310 242 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 ODF3L1Q8IXM7 274 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 ZNF611Q8N823 705 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 WDR31Q8NA23 367 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 DEFB124Q8NES8 71 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 OR1L3Q8NH93 324 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 RNF138Q8WVD3 245 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 PIGCQ92535 297 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 OR6C1Q96RD1 312 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 KLHDC3Q9BQ90 382 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 CHRDL1Q9BU40 450 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 TM2D2Q9BX73 214 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 VSIRQ9H7M9 311 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 SLC25A22Q9H936 323 aa5.48□□□□□ -1.53
USP28-202ENST00000535607 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
USP28-202ENST00000535607 IGLV3-12A0A075B6K2 115 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 IGHV2-70DA0A0C4DH43 119 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 J3QR06 171 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 NDUFS8O00217 210 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 SCRG1O75711 98 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 NDUFB4O95168 129 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 PSG2P11465 335 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 CRYGSP22914 178 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 CD1BP29016 333 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 AMTP48728 403 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 RHOBP62745 196 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 MMDQ15546 238 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 IGFBP7Q16270 282 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 CLEC12BQ2HXU8 276 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 VWC2Q2TAL6 325 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 PDLIM3Q53GG5 364 aaPredicted RBP5.47□□□□□ -1.53
USP28-202ENST00000535607 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 HES3Q5TGS1 186 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 ZNF474Q6S9Z5 364 aaPredicted RBP5.47□□□□□ -1.53
USP28-202ENST00000535607 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 FAM58AQ8N1B3 248 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 OR2M3Q8NG83 312 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 NABP1Q96AH0 204 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 TAAR6Q96RI8 345 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 SCNM1Q9BWG6 230 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 NPCDR1Q9BY65 106 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 WDR54Q9H977 334 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 NRN1Q9NPD7 142 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 KCNIP1Q9NZI2 227 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
USP28-202ENST00000535607 ERRFI1Q9UJM3 462 aaPredicted RBP5.47□□□□□ -1.53
USP28-202ENST00000535607 KCNS2Q9ULS6 477 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 LOXL2Q9Y4K0 774 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 EP300Q09472 2414 aaPredicted RBP5.47□□□□□ -1.53
USP28-202ENST00000535607 ASXL3Q9C0F0 2248 aa5.47□□□□□ -1.53
USP28-202ENST00000535607 EXPH5Q8NEV8 1989 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 ZFHX2Q9C0A1 2572 aaPredicted RBP5.46□□□□□ -1.54
USP28-202ENST00000535607 IGKV1-27A0A075B6S5 117 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TRAV9-2A0A087WT02 112 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 IGHV2-26A0A0B4J1V2 119 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 IGHV2OR16-5A0A0B4J2B6 119 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 hCG_38984A0A1B0GV85 526 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 CBY3A6NI87 242 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SH2D7A6NKC9 451 aaPredicted RBP5.46□□□□□ -1.54
USP28-202ENST00000535607 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 RAB29O14966 203 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms