RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CLEC3BP05452 202 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 CRYGCP07315 174 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 CD7P09564 240 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 SDC2P34741 201 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 MECP2P51608 486 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 APOC4P55056 127 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 SPARTQ8N0X7 666 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 UXS1Q8NBZ7 420 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 WDR89Q96FK6 387 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 GGTLC1Q9BX51 225 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 QTRT1Q9BXR0 403 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 HIPK2Q9H2X6 1198 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 CCL28Q9NRJ3 127 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 GAR1Q9NY12 217 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 ELF5Q9UKW6 265 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.81
CLSTN3-205ENST00000535452 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 NDUFB8O95169 186 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 REG1AP05451 166 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 AREGP15514 252 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 GPR183P32249 361 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 ELLP55199 621 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 SLC25A24Q6NUK1 477 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 OR51H1Q8NH63 302 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 THAP7Q9BT49 309 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 HINT2Q9BX68 163 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 PLEKHA2Q9HB19 425 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 ZC4H2Q9NQZ6 224 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 MRPL27Q9P0M9 148 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-205ENST00000535452 SMIM31A0A1B0GVY4 71 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 A8MWP6 167 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TEX22C9J3V5 150 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 IL6RP08887 468 aaPredicted RBP10□□□□□ -0.81
CLSTN3-205ENST00000535452 TRAPPC2P0DI81 140 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TRAPPC2BP0DI82 140 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 CTRB1P17538 263 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TAS2R46P59540 309 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 ZNF585BQ52M93 769 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 CTRB2Q6GPI1 263 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM217Q8N7C4 229 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 OR5AP2Q8NGF4 316 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM56Q96MV1 263 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TSC22D3Q99576 134 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM140Q9NV12 185 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 EHFQ9NZC4 300 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 S4R3C0 116 aa10□□□□□ -0.81
CLSTN3-205ENST00000535452 ZNF785A8K8V0 405 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 FGF2P09038 288 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 PTBP1P26599 531 aaKnown RBP eCLIP9.99□□□□□ -0.814e-6■■□□□ 11.8
CLSTN3-205ENST00000535452 BMI1P35226 326 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 NEDD8Q15843 81 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 LPCAT3Q6P1A2 487 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 ZNF773Q6PK81 442 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 BTNL8Q6UX41 500 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 NR2C2APQ86WQ0 139 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 OR1L8Q8NGR8 309 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 OR5H2Q8NGV7 314 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 VN1R17PQ8TDU5 208 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 CMTM3Q96MX0 182 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 RETNQ9HD89 108 aa9.99□□□□□ -0.81
CLSTN3-205ENST00000535452 IGLV11-55A0A075B6I3 123 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 CXorf65A6NEN9 183 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 UPK2O00526 184 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 SSX5O60225 188 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 RBMXL2O75526 392 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 IGLV2-14P01704 120 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 FCER2P06734 321 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 OR13C7P0DN81 318 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 TSPAN5P62079 268 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 Q56UQ5 140 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 GVQW1Q8N7I0 195 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 UBAC2Q8NBM4 344 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 OR6F1Q8NGZ6 308 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 BSCL2Q96G97 398 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 C20orf24Q9BUV8 137 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 AUNIPQ9H7T9 357 aa9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-205ENST00000535452 TMEM213A2RRL7 107 aa9.97□□□□□ -0.81
CLSTN3-205ENST00000535452 TGOLN2O43493 480 aa9.97□□□□□ -0.81
CLSTN3-205ENST00000535452 SCGB2A1O75556 95 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms