RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 A0A1B0GX30 115 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 SPINT2O43291 252 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 HBZP02008 142 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 SCTP09683 121 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 CTXN2P0C2S0 81 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 OR5AC1P0C628 307 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 CCL3L1P16619 93 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 FHITP49789 147 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 HTD2P86397 168 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 ICAM4Q14773 271 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 SPNS3Q6ZMD2 512 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
SCARB1-204ENST00000535005 OR52M1Q8NGK5 317 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 MOB3AQ96BX8 217 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 MSI2Q96DH6 328 aaKnown RBP10.06□□□□□ -0.8
SCARB1-204ENST00000535005 BSCL2Q96G97 398 aaPredicted RBP10.06□□□□□ -0.8
SCARB1-204ENST00000535005 SSX3Q99909 188 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 CABLES2Q9BTV7 478 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.06□□□□□ -0.83e-7■■■□□ 14.7
SCARB1-204ENST00000535005 KIAA2026Q5HYC2 2103 aa10.06□□□□□ -0.8
SCARB1-204ENST00000535005 CLDN34H7C241 214 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 OPN1MWP04001 364 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 CXCL1P09341 107 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 GATA3P23771 443 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 ATP6V0CP27449 155 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 SSTR5P35346 364 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 PAX8Q06710 450 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 BTNL3Q6UXE8 466 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 MAPK1IP1LQ8NDC0 245 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 OR1L1Q8NH94 360 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 GALMQ96C23 342 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 FAM210BQ96KR6 192 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 IDI2-AS1Q9NZ38 188 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 CR1P17927 2039 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 ZANQ9Y493 2812 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 YLPM1P49750 1951 aaKnown RBP10.05□□□□□ -0.8
SCARB1-204ENST00000535005 IGKV1-6A0A0C4DH72 117 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 CYB5BO43169 146 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 ERVFRD-1P60508 538 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
SCARB1-204ENST00000535005 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
SCARB1-204ENST00000535005 AKR1C8PQ5T2L2 129 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 Q8N7P7 452 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 RFESDQ8TAC1 157 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM186Q96B77 213 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 RARRES2Q99969 163 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
SCARB1-204ENST00000535005 LPAR2Q9HBW0 351 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 SLC2A9Q9NRM0 540 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 LYRM2Q9NU23 88 aaPredicted RBP10.05□□□□□ -0.8
SCARB1-204ENST00000535005 RNF150Q9ULK6 438 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 ARHGAP32A7KAX9 2087 aa10.05□□□□□ -0.8
SCARB1-204ENST00000535005 LOC102723971A0A1B0GUV8 181 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 A0A1B0GV90 55 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 DFFBO76075 338 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 LOXL3P58215 753 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 ARF6P62330 175 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 GAMTQ14353 236 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 CYB5R2Q6BCY4 276 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
SCARB1-204ENST00000535005 P2RX4Q99571 388 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 GPR61Q9BZJ8 451 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 ONECUT1Q9UBC0 465 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
SCARB1-204ENST00000535005 MMP23AO75900 390 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 GCGP01275 180 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 RD3LP0DJH9 198 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 IGHV1-8P0DP01 117 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
SCARB1-204ENST00000535005 PRTN3P24158 256 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 NKX2-1P43699 371 aaPredicted RBP10.03□□□□□ -0.8
SCARB1-204ENST00000535005 NHLH2Q02577 135 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 PMS2P11Q13670 270 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 H1FOOQ8IZA3 346 aaPredicted RBP10.03□□□□□ -0.8
SCARB1-204ENST00000535005 UBALD1Q8TB05 177 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM56Q96MV1 263 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 J3QLI3 93 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 YPEL1O60688 119 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 LY86O95711 162 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TGFAP01135 160 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TRGC2P03986 189 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 OMGP23515 440 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 HERV-K104P61576 105 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 VAMP2P63027 116 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 PRAMEF5Q5TYX0 476 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 CLEC9AQ6UXN8 241 aa10.03□□□□□ -0.8
SCARB1-204ENST00000535005 PRR18Q8N4B5 295 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms