RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SP5Q6BEB4 398 aaPredicted RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 SPSB3Q6PJ21 355 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 SUN5Q8TC36 379 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 NKX6-2Q9C056 277 aaPredicted RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 MS4A7Q9GZW8 240 aaPredicted RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 TMEM231Q9H6L2 316 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 UBTD1Q9HAC8 227 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 RPRMQ9NS64 109 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 FAM96BQ9Y3D0 163 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 NBEAQ8NFP9 2946 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 A0A1W2PN81 502 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 SRRM4A7MD48 611 aaKnown RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 IFNA4P05014 189 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 CHRNA7P36544 502 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 MRPL41Q8IXM3 137 aaKnown RBP10.88□□□□□ -0.67
BEST1-208ENST00000534553 KIR3DL3Q8N743 410 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 SLC35B3Q9H1N7 401 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 ACACBO00763 2458 aa10.88□□□□□ -0.67
BEST1-208ENST00000534553 YLPM1P49750 1951 aaKnown RBP10.87□□□□□ -0.67
BEST1-208ENST00000534553 PRSS46E5RG02 174 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 SCO1O75880 301 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 TAGLN2P37802 199 aaKnown RBP10.87□□□□□ -0.67
BEST1-208ENST00000534553 REG1BP48304 166 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 RPS16P62249 146 aaKnown RBP10.87□□□□□ -0.67
BEST1-208ENST00000534553 RNF5Q99942 180 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 NPVFQ9HCQ7 196 aa10.87□□□□□ -0.67
BEST1-208ENST00000534553 LOC105371242A0A075B767 164 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 IFNA1P01562 189 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
BEST1-208ENST00000534553 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 KHDC3LQ587J8 217 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 ONECUT1Q9UBC0 465 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 INSIG2Q9Y5U4 225 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 ABCA4P78363 2273 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 A0A1W2PPR1 153 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 RRHO14718 337 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 CEACAM3P40198 252 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 PPT1P50897 306 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
BEST1-208ENST00000534553 RAB31Q13636 194 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 BSXQ3C1V8 233 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 ACOT6Q3I5F7 207 aaPredicted RBP10.86□□□□□ -0.67
BEST1-208ENST00000534553 ZNF787Q6DD87 383 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 TEX45Q8NA69 505 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 RPEQ96AT9 228 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
BEST1-208ENST00000534553 RFNGQ9Y644 331 aa10.86□□□□□ -0.67
BEST1-208ENST00000534553 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 C22orf46C9J442 243 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 CYB5BO43169 146 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 NDUFS6O75380 124 aaKnown RBP10.85□□□□□ -0.67
BEST1-208ENST00000534553 LY6HO94772 140 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 PRTN3P24158 256 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 MAS1LP35410 378 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 CDKN1AP38936 164 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 OPRK1P41145 380 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 OR4P4Q8NGL7 312 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 HINT2Q9BX68 163 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 ACTR3CQ9C0K3 210 aaPredicted RBP10.85□□□□□ -0.67
BEST1-208ENST00000534553 NDUFA4L2Q9NRX3 87 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 SLC39A9Q9NUM3 307 aa10.85□□□□□ -0.67
BEST1-208ENST00000534553 KLF2Q9Y5W3 355 aaPredicted RBP10.85□□□□□ -0.67
BEST1-208ENST00000534553 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 ENSAO43768 121 aaKnown RBP10.84□□□□□ -0.67
BEST1-208ENST00000534553 CA2P00918 260 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 ELLP55199 621 aaPredicted RBP10.84□□□□□ -0.67
BEST1-208ENST00000534553 BTN1A1Q13410 526 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 FFAR4Q5NUL3 377 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 OR10G4Q8NGN3 311 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 CLDND2Q8NHS1 167 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 SMCO3A2RU48 225 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 OVOL3O00110 214 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 HTR1DP28221 377 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
BEST1-208ENST00000534553 DIAPH2-AS1Q14236 149 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 GUCA2BQ16661 112 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 TEPPQ6URK8 271 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 RBMS3Q6XE24 437 aaKnown RBP10.84□□□□□ -0.67
BEST1-208ENST00000534553 MMD2Q8IY49 270 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 OR10G9Q8NGN4 311 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 OR10G7Q8NGN6 311 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 TMEM170AQ8WVE7 144 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 P2RX4Q99571 388 aa10.84□□□□□ -0.67
BEST1-208ENST00000534553 LSM4Q9Y4Z0 139 aaKnown RBP10.84□□□□□ -0.67
BEST1-208ENST00000534553 LY6LH3BQJ8 138 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms