RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 IGLC7A0M8Q6 106 aa13.41□□□□□ -0.26
UBXN1-216ENST00000533908 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
UBXN1-216ENST00000533908 HRASP01112 189 aa13.41□□□□□ -0.26
UBXN1-216ENST00000533908 HIST1H1BP16401 226 aaKnown RBP13.41□□□□□ -0.26
UBXN1-216ENST00000533908 TIMM50Q3ZCQ8 353 aa13.41□□□□□ -0.26
UBXN1-216ENST00000533908 BET1LQ9NYM9 111 aa13.41□□□□□ -0.26
UBXN1-216ENST00000533908 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 CXorf65A6NEN9 183 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 DHFRP00374 187 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 DEFA4P12838 97 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 GALP22466 123 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 GPR183P32249 361 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 GNG2P59768 71 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 WFDC3Q8IUB2 231 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 SPAG16Q8N0X2 631 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 GVQW1Q8N7I0 195 aa13.4□□□□□ -0.26
UBXN1-216ENST00000533908 TXNL4BQ9NX01 149 aaKnown RBP13.4□□□□□ -0.26
UBXN1-216ENST00000533908 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
UBXN1-216ENST00000533908 UPK2O00526 184 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 FCGR2CP31995 323 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 OR2C3Q8N628 320 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 OR1L6Q8NGR2 347 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 SECTM1Q8WVN6 248 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 CXorf58Q96LI9 332 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 CNBD2Q96M20 576 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 DAPK2Q9UIK4 370 aa13.39□□□□□ -0.27
UBXN1-216ENST00000533908 SULT1C2O00338 296 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 SPRY2O43597 315 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 FGF9P31371 208 aaPredicted RBP13.38□□□□□ -0.27
UBXN1-216ENST00000533908 TNFRSF9Q07011 255 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 PLET1Q6UQ28 207 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
UBXN1-216ENST00000533908 OR4A5Q8NH83 315 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 LGALS14Q8TCE9 139 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 ZNF436Q9C0F3 470 aaPredicted RBP13.38□□□□□ -0.27
UBXN1-216ENST00000533908 C5orf66Q9H5L9 145 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
UBXN1-216ENST00000533908 S1PR2O95136 353 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 FCER2P06734 321 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 RPA2P15927 270 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBXN1-216ENST00000533908 ELLP55199 621 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-216ENST00000533908 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 DEFB135Q30KP9 77 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-216ENST00000533908 Q6ZWC4 215 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 BEST4Q8NFU0 473 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 OR13F1Q8NGS4 319 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
UBXN1-216ENST00000533908 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
UBXN1-216ENST00000533908 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBXN1-216ENST00000533908 PPYP01298 95 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 MFAP2P55001 183 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 MSMO1Q15800 293 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 SLC25A38Q96DW6 304 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
UBXN1-216ENST00000533908 TRAV18A0A075B6X5 111 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 TSPAN4O14817 238 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 TGOLN2O43493 480 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 CLEC2LP0C7M8 214 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 BMI1P35226 326 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 TAS2R31P59538 309 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 UBE2UQ5VVX9 321 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 SFXN4Q6P4A7 337 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 IZUMO2Q6UXV1 221 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 HOGA1Q86XE5 327 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
UBXN1-216ENST00000533908 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 TMEM190Q8WZ59 177 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 SPAG8Q99932 426 aaPredicted RBP13.35□□□□□ -0.27
UBXN1-216ENST00000533908 FRAS1Q86XX4 4008 aa13.35□□□□□ -0.27
UBXN1-216ENST00000533908 IGHV3OR16-8A0A075B7F1 116 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 TEX50A0A1B0GTY4 177 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 NUPR2A6NF83 97 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
UBXN1-216ENST00000533908 SCGNO76038 276 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 HPRT1P00492 218 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 ARPC4P59998 168 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 ZNF818PQ6ZRF7 136 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 SLC38A6Q8IZM9 456 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 SPARTQ8N0X7 666 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 ZBTB34Q8NCN2 500 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 RNF183Q96D59 192 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 SRSF8Q9BRL6 282 aaKnown RBP13.34□□□□□ -0.27
UBXN1-216ENST00000533908 AIFM2Q9BRQ8 373 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms