RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	F2R	P25116	425 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	RCVRN	P35243	200 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	ALDH3B2	P48448	385 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	RPEL1	Q2QD12	228 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	FAM209B	Q5JX69	171 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	GPR107	Q5VW38	600 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	CTRB2	Q6GPI1	263 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	MZT2A	Q6P582	158 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	FANCD2OS	Q96PS1	177 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	RSRP1	Q9BUV0	290 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	MRPS26	Q9BYN8	205 aa	Known RBP	13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	TMEM140	Q9NV12	185 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	SIGLEC8	Q9NYZ4	499 aa		13.49	□□□□□ -0.25
BBS1-223	ENST00000533644	GPR31	O00270	319 aa		13.48	□□□□□ -0.25
BBS1-223	ENST00000533644	ZNF182	P17025	639 aa	Predicted RBP	13.48	□□□□□ -0.25
BBS1-223	ENST00000533644	CMTM1	Q8IZ96	169 aa		13.48	□□□□□ -0.25
BBS1-223	ENST00000533644	FBXL7	Q9UJT9	491 aa		13.48	□□□□□ -0.25
BBS1-223	ENST00000533644	DMRT1	Q9Y5R6	373 aa		13.48	□□□□□ -0.25
BBS1-223	ENST00000533644	IGLC7	A0M8Q6	106 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	DHFR	P00374	187 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	CSN3	P07498	182 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	TATDN3	Q17R31	274 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	CADM3	Q8N126	398 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	DMBX1	Q8NFW5	382 aa		13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	DGCR14	Q96DF8	476 aa	Known RBP	13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	SRSF8	Q9BRL6	282 aa	Known RBP	13.47	□□□□□ -0.25
BBS1-223	ENST00000533644	TENM3	Q9P273	2699 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	IGLV11-55	A0A075B6I3	123 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	MARCH11	A6NNE9	402 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	FAM25A	B3EWG3	89 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	FAM25C	B3EWG5	89 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	FAM25G	B3EWG6	89 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	TPPP	O94811	219 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	NDUFB8	O95169	186 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	HIST1H1B	P16401	226 aa	Known RBP	13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	ZNF585B	Q52M93	769 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	GPR141	Q7Z602	305 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	FCAMR	Q8WWV6	532 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	CCDC140	Q96MF4	163 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	COMMD5	Q9GZQ3	224 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644		U3KQK5	164 aa		13.46	□□□□□ -0.25
BBS1-223	ENST00000533644	REG1A	P05451	166 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	LPAR6	P43657	344 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	UCP3	P55916	312 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	ERVK-16	P61578	105 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	TSPAN5	P62079	268 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	THOC7	Q6I9Y2	204 aa	Known RBP	13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	LPCAT3	Q6P1A2	487 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644		Q8N1Y9	231 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	WWC2-AS2	Q96NR7	200 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	ASCL2	Q99929	193 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	QTRT1	Q9BXR0	403 aa	Known RBP	13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	PEMT	Q9UBM1	199 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	EXTL2	Q9UBQ6	330 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	STAB2	Q8WWQ8	2551 aa		13.45	□□□□□ -0.26
BBS1-223	ENST00000533644	PPP5D1	E7EU14	171 aa		13.44	□□□□□ -0.26
BBS1-223	ENST00000533644		H0Y980	276 aa		13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	FRMD6-AS1	P0C7T7	363 aa		13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	RPA2	P15927	270 aa		13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	MECP2	P51608	486 aa	Known RBP	13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	PHLDA2	Q53GA4	152 aa		13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	THAP7	Q9BT49	309 aa	Predicted RBP	13.44	□□□□□ -0.26
BBS1-223	ENST00000533644	GGCT	O75223	188 aa	Known RBP	13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	DEFA4	P12838	97 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	SPCS2	Q15005	226 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	ADAMTSL5	Q6ZMM2	481 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	SLC38A6	Q8IZM9	456 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	OR52I2	Q8NH67	350 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	EEF1AKMT3	Q96AZ1	226 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	ABHD1	Q96SE0	405 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	MIXL1	Q9H2W2	232 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	KLK11	Q9UBX7	282 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	MTFP1	Q9UDX5	166 aa		13.43	□□□□□ -0.26
BBS1-223	ENST00000533644	TEX50	A0A1B0GTY4	177 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644		A8MZ25	164 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644		M0QYG6	137 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	LGALS9	O00182	355 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	KRAS	P01116	189 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	IGHV3-23	P01764	117 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	TRAPPC2	P0DI81	140 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	TRAPPC2B	P0DI82	140 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	S100G	P29377	79 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	G6PC	P35575	357 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	WT1-AS	Q06250	92 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	LCN12	Q6JVE5	192 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	TBC1D26	Q86UD7	250 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	LHFPL1	Q86WI0	220 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	SBSPON	Q8IVN8	264 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644		Q8N402	240 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	OR10W1	Q8NGF6	305 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	OR1L8	Q8NGR8	309 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	OR2K2	Q8NGT1	345 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	C15orf40	Q8WUR7	153 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	CXorf58	Q96LI9	332 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	NDUFA4L2	Q9NRX3	87 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644		S4R3C0	116 aa		13.42	□□□□□ -0.26
BBS1-223	ENST00000533644	MFSD2B	A6NFX1	497 aa		13.41	□□□□□ -0.26
BBS1-223	ENST00000533644	OR2C1	O95371	312 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms