RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CFHR3Q02985 330 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM128Q5BJH2 165 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM167AQ8TBQ9 72 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 RRNAD1Q96FB5 475 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM222Q9H0R3 208 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 BET1LQ9NYM9 111 aa10.14□□□□□ -0.79
TRAPPC4-212ENST00000533058 PLXNB1O43157 2135 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 TRAV6A0A075B6T7 132 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 TRAV41A0A0B4J266 112 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 UPK2O00526 184 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 IGHG4P01861 327 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 ANXA7P20073 488 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 UCP1P25874 307 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 RAB25P57735 213 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 RPL8P62917 257 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 NDPQ00604 133 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 FOXE3Q13461 319 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 C4orf46Q504U0 113 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM268Q5VZI3 342 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 UNQ5815/PRO19632Q6UWF5 114 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 SLC25A42Q86VD7 318 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 GLYATL2Q8WU03 294 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 C20orf85Q9H1P6 137 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 NUDT15Q9NV35 164 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 PRR13Q9NZ81 148 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
TRAPPC4-212ENST00000533058 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 SFT2D2O95562 160 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 DUS4LO95620 317 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 PF4P02776 101 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 APELAP0DMC3 54 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 HLA-GP17693 338 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 MAS1LP35410 378 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 RPL27AP46776 148 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 CDX1P47902 265 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 UBE2MP61081 183 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 SRPXP78539 464 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 PPP1R1AQ13522 171 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM187Q14656 261 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 POU2AF1Q16633 256 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 KHDC1LQ5JSQ8 128 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 C10orf55Q5SWW7 151 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 LGI3Q8N145 548 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 RBPMSQ93062 196 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 GALNT14Q96FL9 552 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 RCC1LQ96I51 464 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 SEC22AQ96IW7 307 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 FYTTD1Q96QD9 318 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 COMMD5Q9GZQ3 224 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 FBXO7Q9Y3I1 522 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 NUBP2Q9Y5Y2 271 aa10.12□□□□□ -0.79
TRAPPC4-212ENST00000533058 MSGN1A6NI15 193 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 G3V318 75 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 HLA-AP01891 365 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR9G9P0C7N8 305 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 CD33P20138 364 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 PSMB8P28062 276 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 PPIFP30405 207 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 MYCNOSP40205 109 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 CRIP2P52943 208 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR2B8PP59922 312 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 SUPT4H1P63272 117 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 CXorf66Q5JRM2 361 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 SELENOHQ8IZQ5 122 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 LFNGQ8NES3 379 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 MYOZ3Q8TDC0 251 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 SRSF12Q8WXF0 261 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 SPIN2AQ99865 258 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 SPIN2BQ9BPZ2 258 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 HINT2Q9BX68 163 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 ZNF355PQ9NSJ1 428 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 PRNDQ9UKY0 176 aa10.11□□□□□ -0.79
TRAPPC4-212ENST00000533058 PIGBOS1A0A0B4J2F0 54 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 A0A1W2PN81 502 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 C9orf170A2RU37 121 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 CDS2O95674 445 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 IGKV1-5P01602 117 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 OR4E1P0C645 316 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 EGR2P11161 476 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 MYOD1P15172 320 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 CHRNA7P36544 502 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 IZUMO4Q1ZYL8 232 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 MRGPRG-AS1Q2M3A8 158 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 TMEM65Q6PI78 240 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 PLET1Q6UQ28 207 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
TRAPPC4-212ENST00000533058 LYG2Q86SG7 212 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms