RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 OPN4Q9UHM6 478 aa6.62□□□□□ -1.35
CTNND1-230ENST00000532245 PSPNO60542 156 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 OR2C1O95371 312 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 CA2P00918 260 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 PRNTQ86SH4 94 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 C11orf94C9JXX5 98 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 MBPP02686 304 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 SELENOTP62341 195 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 CR1LQ2VPA4 569 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 HSD17B13Q7Z5P4 300 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 ZNF680Q8NEM1 530 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 CLDND2Q8NHS1 167 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 WNT10AQ9GZT5 417 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 USF2Q15853 346 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 C12orf54Q6X4T0 127 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 SPRY4Q9C004 299 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 ZNF429Q86V71 674 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 BPIFA4PQ86YQ2 179 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 OR11H7Q8NGC8 314 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 RSG1Q9BU20 258 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 C21orf62Q9NYP8 219 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 PLXND1Q9Y4D7 1925 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 NDUFS7O75251 213 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 FABP9Q0Z7S8 132 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 DMRTC2Q8IXT2 367 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 OR5AU1Q8NGC0 362 aa6.61□□□□□ -1.35
CTNND1-230ENST00000532245 BEX4Q9NWD9 120 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-230ENST00000532245 ACACBO00763 2458 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 CACNA1AO00555 2505 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 AP4M1O00189 453 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 PAGE4O60829 102 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ZNF735P0CB33 412 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 UCP3P55916 312 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 PLAURQ03405 335 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ANGPTL6Q8NI99 470 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 SPSB4Q96A44 273 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 REG4Q9BYZ8 158 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 TOLLIPQ9H0E2 274 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 OR5AC2Q9NZP5 309 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 MOB4Q9Y3A3 225 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 PSMB11A5LHX3 300 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 CXorf1O96002 111 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 MGPP08493 103 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 SUMO1P63165 101 aaKnown RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ADORA2A-AS1P86434 159 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM187Q14656 261 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 TUSC1Q2TAM9 212 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 OR10C1Q96KK4 312 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 NXF2Q9GZY0 626 aaKnown RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 PHF3Q92576 2039 aaKnown RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 OR2T8A6NH00 312 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 SOD3P08294 240 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 DLX6P56179 175 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ZP1P60852 638 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 DEFB121Q5J5C9 76 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ALX4Q9H161 411 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 PEMTQ9UBM1 199 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ETV2O00321 342 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 S100A8P05109 93 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 NTF3P20783 257 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 ATP6V0CP27449 155 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 NTF4P34130 210 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 HLA-DRB5Q30154 266 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM155Q4W5P6 130 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 SRSF12Q8WXF0 261 aaKnown RBP6.6□□□□□ -1.35
CTNND1-230ENST00000532245 DCAF16Q9NXF7 216 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 SELENOKQ9Y6D0 94 aa6.6□□□□□ -1.35
CTNND1-230ENST00000532245 IGKV1D-17A0A075B6S4 117 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 TRBV6-7A0A0A0MS04 114 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 RNASEK-C17orf49H0YIS7 233 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 FOSL1P15407 271 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 HIST1H3AP68431 136 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 HEPN1Q6WQI6 88 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 G3V3Q6 166 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 J3QRE1 110 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 PITX3O75364 302 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 SAA4P35542 130 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 HS3ST6Q96QI5 342 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 IGKV1D-13A0A0B4J2D9 117 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 DEDDO75618 318 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 AMY1AP04745 511 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 IGKV1-13P0DP09 117 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 CAMPP49913 170 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 RHOGP84095 191 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 TPTE2P1Q5T6R2 138 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 M0R1W7 72 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 EIF3GO75821 320 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTNND1-230ENST00000532245 CD74P04233 296 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 SFTA3P0C7M3 94 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 HIST1H1AQ02539 215 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-230ENST00000532245 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms