RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 NUDT15Q9NV35 164 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 CACFD1Q9UGQ2 172 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 NUBP2Q9Y5Y2 271 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 WSB1Q9Y6I7 421 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 TMEM56-RWDD3S4R434 201 aa9.32□□□□□ -0.92
PPFIA1-220ENST00000532024 DUXBA0A1W2PPF3 345 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 DHFRP00374 187 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 IGHG4P01861 327 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 ELANEP08246 267 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 FOXE3Q13461 319 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 LFNGQ8NES3 379 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 CASTOR1Q8WTX7 329 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 CITED1Q99966 193 aa9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 FAM103A1Q9BTL3 118 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 QTRT1Q9BXR0 403 aaKnown RBP9.31□□□□□ -0.92
PPFIA1-220ENST00000532024 TRAV6A0A075B6T7 132 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 A0A0B4J2A0 478 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 A0A1W2PN81 502 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 MSGN1A6NI15 193 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 CYB5BO43169 146 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 SFT2D2O95562 160 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 OR4E1P0C645 316 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 PF4V1P10720 104 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 CHRNA7P36544 502 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 PPP1R1AQ13522 171 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 TMEM187Q14656 261 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 PLET1Q6UQ28 207 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 LYG2Q86SG7 212 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 ZNF329Q86UD4 541 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 SELENOHQ8IZQ5 122 aaKnown RBP9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 MINDY2Q8NBR6 621 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 COQ8AQ8NI60 647 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 LSM10Q969L4 123 aaKnown RBP9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 ALX4Q9H161 411 aaPredicted RBP9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 SLA2Q9H6Q3 261 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 SHPKQ9UHJ6 478 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 FLVCR2Q9UPI3 526 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 ZNF257Q9Y2Q1 563 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 FBXO7Q9Y3I1 522 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 OR51B2Q9Y5P1 312 aa9.3□□□□□ -0.92
PPFIA1-220ENST00000532024 TCRBV4S1A1TA0A5B7 111 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 C9orf170A2RU37 121 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 G3V318 75 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 H3BUA1 57 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 M0QZ24 198 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 DUS4LO95620 317 aaKnown RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 IGKV1-5P01602 117 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 TRAPPC2P0DI81 140 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 TRAPPC2BP0DI82 140 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 OR2B8PP59922 312 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 CFHR3Q02985 330 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 DHRS2Q13268 280 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 C10orf55Q5SWW7 151 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 HINT2Q9BX68 163 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 ZFP57Q9NU63 452 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 COA4Q9NYJ1 87 aa9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-220ENST00000532024 TRAV3A0A0B4J244 114 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 PTTG1O95997 202 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 IFNA21P01568 189 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 IFNA17P01571 189 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 OR9G9P0C7N8 305 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 SULT1A3P0DMM9 295 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 SULT1A4P0DMN0 295 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 CD28P10747 220 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 PPIFP30405 207 aaKnown RBP9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 IFITM3Q01628 133 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 NRARPQ7Z6K4 114 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 ZNF429Q86V71 674 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 LRTM2Q8N967 370 aa9.28□□□□□ -0.92
PPFIA1-220ENST00000532024 DUSP18Q8NEJ0 188 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms