RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 UFD1Q92890 307 aa6.81□□□□□ -1.32
NEDD8-206ENST00000531430 TAS2R8Q9NYW2 309 aa6.81□□□□□ -1.32
NEDD8-206ENST00000531430 THYN1Q9P016 225 aa6.81□□□□□ -1.32
NEDD8-206ENST00000531430 RBMX2Q9Y388 322 aaKnown RBP6.81□□□□□ -1.32
NEDD8-206ENST00000531430 V9GY05 133 aa6.81□□□□□ -1.32
NEDD8-206ENST00000531430 IGHV3-49A0A0A0MS15 119 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 A0A1B0GW64 132 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 M0R2N4 97 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 TGOLN2O43493 480 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 TNFSF12O43508 249 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 ARL6IP5O75915 188 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 YIF1AO95070 293 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 HRASP01112 189 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 GNAO1P09471 354 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 CD37P11049 281 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 HLA-GP17693 338 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 GALP22466 123 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 CALRP27797 417 aaKnown RBP6.8□□□□□ -1.32
NEDD8-206ENST00000531430 ELLP55199 621 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-206ENST00000531430 RPS25P62851 125 aaKnown RBP6.8□□□□□ -1.32
NEDD8-206ENST00000531430 RPL8P62917 257 aaKnown RBP6.8□□□□□ -1.32
NEDD8-206ENST00000531430 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 LAIR2Q6ISS4 152 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 MFSD4AQ8N468 514 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 OR4S2Q8NH73 311 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 CENPOQ9BU64 300 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 ATG5Q9H1Y0 275 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 ELF5Q9UKW6 265 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-206ENST00000531430 OR2W1Q9Y3N9 320 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
NEDD8-206ENST00000531430 IGLV11-55A0A075B6I3 123 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 METTL21EPA6NDL7 271 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 RANBP1P43487 201 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 MFAP2P55001 183 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 TMEM91Q6ZNR0 172 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
NEDD8-206ENST00000531430 ZNF502Q8TBZ5 544 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 COMMD5Q9GZQ3 224 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 PLCXD1Q9NUJ7 323 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 SCN3BQ9NY72 215 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
NEDD8-206ENST00000531430 IGHV3OR16-13A0A075B7E8 117 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 IGHV3-74A0A0B4J1X5 117 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 TRAV3A0A0B4J244 114 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 IGKV1D-13A0A0B4J2D9 117 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CYB5BO43169 146 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 SLC22A5O76082 557 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CA1P00915 261 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-206ENST00000531430 HLA-DQB1P01920 261 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CTXN2P0C2S0 81 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 IGKV1-13P0DP09 117 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 HIST1H1DP16402 221 aaKnown RBP6.78□□□□□ -1.32
NEDD8-206ENST00000531430 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.327e-6■□□□□ 9.8
NEDD8-206ENST00000531430 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-206ENST00000531430 TCTAP57738 103 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 TMEM187Q14656 261 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CDNFQ49AH0 187 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 Q56UQ5 140 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 OR10W1Q8NGF6 305 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 TMEM190Q8WZ59 177 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CMTM3Q96MX0 182 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 HSD17B10Q99714 261 aaKnown RBP6.78□□□□□ -1.32
NEDD8-206ENST00000531430 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
NEDD8-206ENST00000531430 MUC4Q99102 2169 aa6.78□□□□□ -1.32
NEDD8-206ENST00000531430 PRSS29PA6NIE9 313 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 CGB1A6NKQ9 187 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 MFNGO00587 321 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 PDCD5O14737 125 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 MRPS14O60783 128 aaKnown RBP6.77□□□□□ -1.33
NEDD8-206ENST00000531430 DIRAS3O95661 229 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 OR13C7P0DN81 318 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 OR2B8PP59922 312 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
NEDD8-206ENST00000531430 FABP5Q01469 135 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 TRAM1Q15629 374 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 LINC00336Q6ZUF6 198 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 NR2C2APQ86WQ0 139 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 SPAG16Q8N0X2 631 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 DMBX1Q8NFW5 382 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 SECTM1Q8WVN6 248 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 GIMAP1Q8WWP7 306 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 RNF2Q99496 336 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 AIFM2Q9BRQ8 373 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 CHRDL1Q9BU40 450 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 RHPN1-AS1Q9BWJ2 59 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 ZNF436Q9C0F3 470 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-206ENST00000531430 CCL28Q9NRJ3 127 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 SMPXQ9UHP9 88 aa6.77□□□□□ -1.33
NEDD8-206ENST00000531430 ERICH4A6NGS2 130 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 DNASE2O00115 360 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-206ENST00000531430 SULT1C2O00338 296 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 NDUFA4O00483 81 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 UPK2O00526 184 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 IGLV2-14P01704 120 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 FCER2P06734 321 aa6.76□□□□□ -1.33
NEDD8-206ENST00000531430 TRAPPC2P0DI81 140 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms