RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-208	ENST00000530887	OR2B11	Q5JQS5	317 aa		13.65	□□□□□ -0.22
PSMC3-208	ENST00000530887	LAMTOR1	Q6IAA8	161 aa		13.65	□□□□□ -0.22
PSMC3-208	ENST00000530887	VKORC1L1	Q8N0U8	176 aa		13.65	□□□□□ -0.22
PSMC3-208	ENST00000530887	COMMD5	Q9GZQ3	224 aa		13.65	□□□□□ -0.22
PSMC3-208	ENST00000530887	PLEC	Q15149	4684 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	TMEM127	O75204	238 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	HPRT1	P00492	218 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	HLA-A	P01891	365 aa	Known RBP	13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	CLEC3B	P05452	202 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	NQO2	P16083	231 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	PTBP1	P26599	531 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	GABARAPL2	P60520	117 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	POU2AF1	Q16633	256 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	C22orf42	Q6IC83	251 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	OR2C3	Q8N628	320 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	VN1R17P	Q8TDU5	208 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	LINC00476	Q8WZB0	136 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	FCGR1B	Q92637	280 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	OVOL2	Q9BRP0	275 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	WFDC10A	Q9H1F0	79 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	C5orf66	Q9H5L9	145 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	HRASLS	Q9HDD0	168 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	TAS2R8	Q9NYW2	309 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	MLX	Q9UH92	298 aa		13.64	□□□□□ -0.23
PSMC3-208	ENST00000530887	IGKV1D-13	A0A0B4J2D9	117 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	KIR2DL5B	A0A0G2JN68	375 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	KIR2DL5B	A0A0G2JPC4	375 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	TMEM235	A6NFC5	223 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	IGKV1-13	P0DP09	117 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	AREG	P15514	252 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	TNFRSF9	Q07011	255 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	TIMM50	Q3ZCQ8	353 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	TM4SF20	Q53R12	229 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	SPSB3	Q6PJ21	355 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	PLET1	Q6UQ28	207 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	KIR2DL5A	Q8N109	375 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	KIR2DL5B	Q8NHK3	375 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	NUDCD2	Q8WVJ2	157 aa		13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	KLK5	Q9Y337	293 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC3-208	ENST00000530887	CBX5	P45973	191 aa		13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	BTNL8	Q6UX41	500 aa		13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	SPAG16	Q8N0X2	631 aa		13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	BEST4	Q8NFU0	473 aa		13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	ETV7	Q9Y603	341 aa		13.62	□□□□□ -0.23
PSMC3-208	ENST00000530887	ALMS1	Q8TCU4	4167 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	CXorf65	A6NEN9	183 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	TSPAN4	O14817	238 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	SCAF4	O95104	1147 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	CMC4	P56277	68 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	OR2B8P	P59922	312 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	SSX9	Q7RTT3	188 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	CADM3	Q8N126	398 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	OR13F1	Q8NGS4	319 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	ZNF502	Q8TBZ5	544 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	SECTM1	Q8WVN6	248 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	CACNG8	Q8WXS5	425 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	BSCL2	Q96G97	398 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	QTRT1	Q9BXR0	403 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	PLEKHA2	Q9HB19	425 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	DAZ1	Q9NQZ3	744 aa	Known RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	RHBDL2	Q9NX52	303 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	COMMD9	Q9P000	198 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	ELF5	Q9UKW6	265 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	SSR3	Q9UNL2	185 aa		13.61	□□□□□ -0.23
PSMC3-208	ENST00000530887	HYDIN	Q4G0P3	5121 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887		E7EUB6	86 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	PPY	P01298	95 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	IGHV3-23	P01764	117 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	FCGR2C	P31995	323 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	ERVK-16	P61578	105 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	ZNF585B	Q52M93	769 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	UBE2U	Q5VVX9	321 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	SFXN4	Q6P4A7	337 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	NRG4	Q8WWG1	115 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	TXNL4B	Q9NX01	149 aa	Known RBP	13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887	DAPK2	Q9UIK4	370 aa		13.6	□□□□□ -0.23
PSMC3-208	ENST00000530887		A0A1B0GW64	132 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	OR4C46	A6NHA9	309 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	UPK2	O00526	184 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	TGOLN2	O43493	480 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	SPRY2	O43597	315 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	GPR183	P32249	361 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	BRWD1-AS2	P59051	145 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	NR2C2AP	Q86WQ0	139 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	HOGA1	Q86XE5	327 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	STPG3	Q8N7X2	389 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	GDPD1	Q8N9F7	314 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	TMEM190	Q8WZ59	177 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	CNBD2	Q96M20	576 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	DIABLO	Q9NR28	239 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	RAB26	Q9ULW5	256 aa		13.59	□□□□□ -0.23
PSMC3-208	ENST00000530887	IGLC7	A0M8Q6	106 aa		13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	MFSD2B	A6NFX1	497 aa		13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	NDUFA4	O00483	81 aa		13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	DMBX1	Q8NFW5	382 aa		13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	GIMAP1	Q8WWP7	306 aa		13.58	□□□□□ -0.24
PSMC3-208	ENST00000530887	SLC5A7	Q9GZV3	580 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms