RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 CCDC140Q96MF4 163 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 FANCD2OSQ96PS1 177 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 AIFM2Q9BRQ8 373 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 HRASLSQ9HDD0 168 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 DIABLOQ9NR28 239 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 S4R3C0 116 aa12.84□□□□□ -0.35
PKP3-207ENST00000530695 LCE6AA0A183 80 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 CCDC160A6NGH7 325 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 SULT1C2O00338 296 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 REG1AP05451 166 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 CD7P09564 240 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 DEFA4P12838 97 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 CTRB1P17538 263 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 FXYD4P59646 89 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 TIMM50Q3ZCQ8 353 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 OR4A47Q6IF82 309 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 RETNQ9HD89 108 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 BET1LQ9NYM9 111 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 TECRQ9NZ01 308 aaKnown RBP12.83□□□□□ -0.36
PKP3-207ENST00000530695 LYSTQ99698 3801 aa12.83□□□□□ -0.36
PKP3-207ENST00000530695 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
PKP3-207ENST00000530695 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
PKP3-207ENST00000530695 CATR1Q13166 79 aa12.82□□□□□ -0.36
PKP3-207ENST00000530695 LINC00322Q6ZN03 302 aaPredicted RBP12.82□□□□□ -0.36
PKP3-207ENST00000530695 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
PKP3-207ENST00000530695 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
PKP3-207ENST00000530695 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
PKP3-207ENST00000530695 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 CBLN1P23435 193 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 CBX5P45973 191 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 TAS2R31P59538 309 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 ZNF818PQ6ZRF7 136 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 CACNG8Q8WXS5 425 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 DGCR14Q96DF8 476 aaKnown RBP12.81□□□□□ -0.36
PKP3-207ENST00000530695 WDR89Q96FK6 387 aaPredicted RBP12.81□□□□□ -0.36
PKP3-207ENST00000530695 WFDC10AQ9H1F0 79 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 KLK9Q9UKQ9 250 aa12.81□□□□□ -0.36
PKP3-207ENST00000530695 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
PKP3-207ENST00000530695 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
PKP3-207ENST00000530695 HPRT1P00492 218 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
PKP3-207ENST00000530695 NQO2P16083 231 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 OR2B8PP59922 312 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 OR51H1Q8NH63 302 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
PKP3-207ENST00000530695 SELENOKQ9Y6D0 94 aa12.8□□□□□ -0.36
PKP3-207ENST00000530695 TRBV7-1A0A0A6YYK4 115 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 TRAV3A0A0B4J244 114 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 TMEM213A2RRL7 107 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 A8MWP6 167 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 ZNF701M0R085 212 aaPredicted RBP12.79□□□□□ -0.36
PKP3-207ENST00000530695 UPK2O00526 184 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 TMEM127O75204 238 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 CLEC3BP05452 202 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 HERV-K104P61576 105 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 POU2AF1Q16633 256 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
PKP3-207ENST00000530695 CLVS1Q8IUQ0 354 aaPredicted RBP12.79□□□□□ -0.36
PKP3-207ENST00000530695 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
PKP3-207ENST00000530695 IFT46Q9NQC8 304 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
PKP3-207ENST00000530695 IGLC7A0M8Q6 106 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 XRCC3O43542 346 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 SLC16A13Q7RTY0 426 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 TMEM61Q8N0U2 210 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 CD300LFQ8TDQ1 290 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 S100A16Q96FQ6 103 aaKnown RBP12.78□□□□□ -0.36
PKP3-207ENST00000530695 PLEKHA2Q9HB19 425 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 EHFQ9NZC4 300 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 MLXQ9UH92 298 aa12.78□□□□□ -0.36
PKP3-207ENST00000530695 S1PR2O95136 353 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 GNRHRP30968 328 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 GPR183P32249 361 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 TGFBR1P36897 503 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 CROCCP3Q8IVE0 287 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 BORCS5Q969J3 196 aa12.77□□□□□ -0.37
PKP3-207ENST00000530695 SRSF8Q9BRL6 282 aaKnown RBP12.77□□□□□ -0.37
PKP3-207ENST00000530695 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms