RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 UBE2CO00762 179 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 REG1AP05451 166 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 MYOD1P15172 320 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 HLA-GP17693 338 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 MYL9P24844 172 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 NR2C2APQ86WQ0 139 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 SLC38A6Q8IZM9 456 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 ZNF502Q8TBZ5 544 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
CAPN1-219ENST00000530495 TRDV1A0A1B0GX56 115 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 PTBP1P26599 531 aaKnown RBP eCLIP11.08□□□□□ -0.64
CAPN1-219ENST00000530495 AQP4P55087 323 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 OR2B8PP59922 312 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 GPHA2Q96T91 129 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-219ENST00000530495 ZNF436Q9C0F3 470 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-219ENST00000530495 NDUFB11Q9NX14 153 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 ANXA10Q9UJ72 324 aa11.08□□□□□ -0.64
CAPN1-219ENST00000530495 KLK5Q9Y337 293 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-219ENST00000530495 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 TSPAN4O14817 238 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 GPR183P32249 361 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 MSMO1Q15800 293 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 TBCEQ15813 527 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-219ENST00000530495 DEFB135Q30KP9 77 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 TIMM50Q3ZCQ8 353 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 ZNF367Q7RTV3 350 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 NUDCD2Q8WVJ2 157 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 RNF183Q96D59 192 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 THYN1Q9P016 225 aa11.07□□□□□ -0.64
CAPN1-219ENST00000530495 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 SSX5O60225 188 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
CAPN1-219ENST00000530495 STPG3Q8N7X2 389 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 NRG4Q8WWG1 115 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 SRSF8Q9BRL6 282 aaKnown RBP11.06□□□□□ -0.64
CAPN1-219ENST00000530495 HRASLSQ9HDD0 168 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 CCL28Q9NRJ3 127 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 UBQLN2Q9UHD9 624 aa11.06□□□□□ -0.64
CAPN1-219ENST00000530495 UPK2O00526 184 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 RBFOX2O43251 390 aaKnown RBP eCLIP11.05□□□□□ -0.641e-5■■■■□ 19.7
CAPN1-219ENST00000530495 SCGNO76038 276 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 FGF2P09038 288 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 GNG2P59768 71 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 SPAG16Q8N0X2 631 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
CAPN1-219ENST00000530495 TRAV3A0A0B4J244 114 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 NOTOA8MTQ0 251 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 TGOLN2O43493 480 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 TNFSF12O43508 249 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 TAS2R31P59538 309 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 LAMTOR1Q6IAA8 161 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 COMMD5Q9GZQ3 224 aa11.04□□□□□ -0.64
CAPN1-219ENST00000530495 DAZ1Q9NQZ3 744 aaKnown RBP11.04□□□□□ -0.64
CAPN1-219ENST00000530495 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 SULT1C2O00338 296 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 CYB5BO43169 146 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 HPRT1P00492 218 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 NQO2P16083 231 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 FCGR2CP31995 323 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 ZNF773Q6PK81 442 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-219ENST00000530495 GALNT14Q96FL9 552 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
CAPN1-219ENST00000530495 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 K7EMT4 169 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 NDUFA4O00483 81 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 PPYP01298 95 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 SERPINE2P07093 398 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 PTHLHP12272 177 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 RPA2P15927 270 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 FGF9P31371 208 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-219ENST00000530495 ARPC4P59998 168 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 SPSB3Q6PJ21 355 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 TPRA1Q86W33 373 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 OR13F1Q8NGS4 319 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-219ENST00000530495 ATP6V0BQ99437 205 aa11.02□□□□□ -0.65
CAPN1-219ENST00000530495 QTRT1Q9BXR0 403 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms