RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 NUP50Q9UKX7 468 aa11.59□□□□□ -0.55
TTC39A-216ENST00000530004 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 UPK2O00526 184 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 FSHBP01225 129 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 SPCS3P61009 180 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 BAXQ07812 192 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 SPANXN5Q5MJ07 72 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 FAM120AOSQ5T036 256 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 STX12Q86Y82 276 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 PUSL1Q8N0Z8 303 aaKnown RBP11.58□□□□□ -0.56
TTC39A-216ENST00000530004 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 WFDC1Q9HC57 220 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 FOXA2Q9Y261 457 aaPredicted RBP11.58□□□□□ -0.56
TTC39A-216ENST00000530004 HILPDAQ9Y5L2 63 aa11.58□□□□□ -0.56
TTC39A-216ENST00000530004 HIVEP1P15822 2718 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 BAP18Q8IXM2 172 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 TEX29Q8N6K0 151 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 TMEM217Q8N7C4 229 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
TTC39A-216ENST00000530004 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 F8P00451 2351 aa11.57□□□□□ -0.56
TTC39A-216ENST00000530004 TIMM23O14925 209 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 KBTBD11O94819 623 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 METTL15P1P0C7V9 234 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 SULT1A1P50225 295 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 DYNLT3P51808 116 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 LGALS4P56470 323 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 CLINT1Q14677 625 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
TTC39A-216ENST00000530004 Q71RC1 249 aaPredicted RBP11.56□□□□□ -0.56
TTC39A-216ENST00000530004 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 OR5C1Q8NGR4 320 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 RITA1Q96K30 269 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 TCF19Q9Y242 345 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 JTBO76095 146 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 MYOD1P15172 320 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 PAX6P26367 422 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 LGALS7P47929 136 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
TTC39A-216ENST00000530004 EIF5AP63241 154 aaKnown RBP11.56□□□□□ -0.56
TTC39A-216ENST00000530004 MINOS1Q5TGZ0 78 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 RUSC1-AS1Q66K80 236 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 IL17RELQ6ZVW7 336 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 MINOS1-NBL1R4GNA1 71 aa11.56□□□□□ -0.56
TTC39A-216ENST00000530004 MAST4O15021 2626 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 NPFFO15130 113 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 SLC25A17O43808 307 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-216ENST00000530004 BPIFB3P59826 476 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 SSX2Q16385 188 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 UBAC2Q8NBM4 344 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 OR1S2Q8NGQ3 325 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 OR4A5Q8NH83 315 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
TTC39A-216ENST00000530004 OR4C12Q96R67 309 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 CLCC1Q96S66 551 aa11.55□□□□□ -0.56
TTC39A-216ENST00000530004 STRAPQ9Y3F4 350 aaKnown RBP11.55□□□□□ -0.56
TTC39A-216ENST00000530004 BORCS7-ASMTA0A0B4J1R7 106 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 FGF2P09038 288 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 HNF1AP20823 631 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 SAA4P35542 130 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 RAB14P61106 215 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 FAM74A1Q5RGS3 127 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 CFHR4Q92496 578 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 ZNF257Q9Y2Q1 563 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
TTC39A-216ENST00000530004 HIVEP2P31629 2446 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 OOSP1A8MZH6 123 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 LY86O95711 162 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 OPN1MWP04001 364 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 OPN1MW2P0DN77 364 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 OPN1MW3P0DN78 364 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 CNTFRP26992 372 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 CD1BP29016 333 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-216ENST00000530004 RPL8P62917 257 aaKnown RBP11.54□□□□□ -0.56
TTC39A-216ENST00000530004 ARL16Q0P5N6 197 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 ZNF266Q14584 549 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 NDUFA5Q16718 116 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms