RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 INPP1P49441 399 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 KHDC1LQ5JSQ8 128 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 PYHIN1Q6K0P9 492 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 LIN54Q6MZP7 749 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 TEX38Q6PEX7 206 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 CNIH2Q6PI25 160 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 H1FOOQ8IZA3 346 aaPredicted RBP6.58□□□□□ -1.36
SSBP3-212ENST00000528930 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.58□□□□□ -1.36
SSBP3-212ENST00000528930 OR8U1Q8NH10 309 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 NUDCD2Q8WVJ2 157 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 DPF1Q92782 380 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 RNF5Q99942 180 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 ST6GALNAC5Q9BVH7 336 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 OR2D2Q9H210 308 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 OR51J1Q9H342 316 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 FBXL15Q9H469 300 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 PRELID3BQ9Y3B1 194 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 WASHC3Q9Y3C0 194 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 TRAV18A0A075B6X5 111 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 A0A0A6YYH2 397 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 A6NJ64 397 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 G3V318 75 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 H7C2Y5 167 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 M0R1X1 148 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 GSTZ1O43708 216 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 RBBP9O75884 186 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 SNAPINO95295 136 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 ELANEP08246 267 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 FGF2P09038 288 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 EGR2P11161 476 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 VDAC1P21796 283 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 PSMB8P28062 276 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 THBS3P49746 956 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 MECP2P51608 486 aaKnown RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 PITPNAQ00169 270 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 NDPQ00604 133 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 FOXE3Q13461 319 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 EXOSC2Q13868 293 aaKnown RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 KIAA0141Q14154 515 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 PSG5Q15238 335 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 FCN2Q15485 313 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 LGALSLQ3ZCW2 172 aaPredicted RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 C19orf54Q5BKX5 351 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
SSBP3-212ENST00000528930 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 GPR61Q9BZJ8 451 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 KIAA1456Q9P272 454 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 FBXO7Q9Y3I1 522 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 WSB1Q9Y6I7 421 aa6.57□□□□□ -1.36
SSBP3-212ENST00000528930 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 LINC00473A8K010 186 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 HMSDA8MTL9 139 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 IGLV2-14P01704 120 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 IGLV2-23P01705 113 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 PF4P02776 101 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 CRYGBP07316 175 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 CTXN2P0C2S0 81 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 OR5H8P0DN80 308 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 PTHLHP12272 177 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 NFYAP23511 347 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 RPS16P62249 146 aaKnown RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 CX3CL1P78423 397 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 SSBP2P81877 361 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 CXorf66Q5JRM2 361 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 ZNF660Q6AZW8 331 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 PDPNQ86YL7 162 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 GVQW1Q8N7I0 195 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 MYOZ3Q8TDC0 251 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 P2RX4Q99571 388 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 GINS4Q9BRT9 223 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 THAP7Q9BT49 309 aaPredicted RBP6.56□□□□□ -1.36
SSBP3-212ENST00000528930 KLK15Q9H2R5 256 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 AUNIPQ9H7T9 357 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 PARP11Q9NR21 331 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 SLC35D1Q9NTN3 355 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 ANXA10Q9UJ72 324 aa6.56□□□□□ -1.36
SSBP3-212ENST00000528930 TRAV41A0A0B4J266 112 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 SRRM4A7MD48 611 aaKnown RBP6.55□□□□□ -1.36
SSBP3-212ENST00000528930 SNRPGP15A8MWD9 76 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 XRCC3O43542 346 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 SOX15O60248 233 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 TUSC2O75896 110 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 OR2A4O95047 310 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 SPDEFO95238 335 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 APOA2P02652 100 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 TCRBP04435 133 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 IL5P05113 134 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 GIPP09681 153 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-212ENST00000528930 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 MYCNOSP40205 109 aa6.55□□□□□ -1.36
SSBP3-212ENST00000528930 RAP2BP61225 183 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms