RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 DEFA5Q01523 94 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 TCTEX1D1Q8N7M0 179 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 GLYATL2Q8WU03 294 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 MARVELD1Q9BSK0 173 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 NAA60Q9H7X0 242 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 FAM212BQ9NTI7 297 aaPredicted RBP10.04□□□□□ -0.8
SCN3B-205ENST00000528267 NSG2Q9Y328 171 aa10.04□□□□□ -0.8
SCN3B-205ENST00000528267 HMX3A6NHT5 357 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 MSGN1A6NI15 193 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 INMT-MINDY4F8WBC2 141 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 BCAP31P51572 246 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 CCDC71LQ8N9Z2 235 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 ABHD5Q8WTS1 349 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 NUDT15Q9NV35 164 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 FLVCR2Q9UPI3 526 aa10.03□□□□□ -0.8
SCN3B-205ENST00000528267 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
SCN3B-205ENST00000528267 PKD1L1Q8TDX9 2849 aa10.02□□□□□ -0.8
SCN3B-205ENST00000528267 TRAV6A0A075B6T7 132 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 NDUFB6O95139 128 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 CNIH1O95406 144 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 OR2B8PP59922 312 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.81
SCN3B-205ENST00000528267 RPL8P62917 257 aaKnown RBP10.02□□□□□ -0.81
SCN3B-205ENST00000528267 SLC35B1P78383 322 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 DHODHQ02127 395 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 FOXE3Q13461 319 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 TMEM187Q14656 261 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 RBMS2Q15434 407 aaKnown RBP10.02□□□□□ -0.81
SCN3B-205ENST00000528267 AKIRIN2Q53H80 203 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 TEX38Q6PEX7 206 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 DMBX1Q8NFW5 382 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 OR4X2Q8NGF9 303 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 VSTM2AQ8TAG5 236 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 C20orf85Q9H1P6 137 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 GNB4Q9HAV0 340 aa10.02□□□□□ -0.81
SCN3B-205ENST00000528267 FOXA2Q9Y261 457 aaPredicted RBP10.02□□□□□ -0.81
SCN3B-205ENST00000528267 TEX13DA0A0J9YY54 714 aaPredicted RBP10.01□□□□□ -0.81
SCN3B-205ENST00000528267 CDS2O95674 445 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 DHFRP00374 187 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 ELANEP08246 267 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 AREGP15514 252 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 HLA-GP17693 338 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
SCN3B-205ENST00000528267 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 Q6ZRM9 215 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 TMED4Q7Z7H5 227 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
SCN3B-205ENST00000528267 CADM3Q8N126 398 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 OR5T1Q8NG75 326 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 GALNT14Q96FL9 552 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
SCN3B-205ENST00000528267 DNAH3Q8TD57 4116 aa10.01□□□□□ -0.81
SCN3B-205ENST00000528267 TEX50A0A1B0GTY4 177 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 C15orf61A6NNL5 157 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 PFDN1O60925 122 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 PRH1P02810 166 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 PF4V1P10720 104 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 AKR1C4P17516 323 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 S100GP29377 79 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 MAS1LP35410 378 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 RAB9AP51151 201 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 RAB25P57735 213 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 PPP1R1AQ13522 171 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 TATDN3Q17R31 274 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 DEFB136Q30KP8 78 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 KHDC1LQ5JSQ8 128 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 COMMD1Q8N668 190 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 OR10W1Q8NGF6 305 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 FAM110DQ8TAY7 271 aaPredicted RBP10□□□□□ -0.81
SCN3B-205ENST00000528267 MS4A10Q96PG2 267 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 DUX3Q96PT4 197 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 FYTTD1Q96QD9 318 aaKnown RBP10□□□□□ -0.81
SCN3B-205ENST00000528267 SLC25A21Q9BQT8 299 aaPredicted RBP10□□□□□ -0.81
SCN3B-205ENST00000528267 ALX4Q9H161 411 aaPredicted RBP10□□□□□ -0.81
SCN3B-205ENST00000528267 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
SCN3B-205ENST00000528267 A0A0B4J293 547 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 IGLC7A0M8Q6 106 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 REG1AP05451 166 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 SERPINE2P07093 398 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 ERVK-16P61578 105 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 C2orf68Q2NKX9 166 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 ANKRD55Q3KP44 614 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 TMEM56Q96MV1 263 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 PHB2Q99623 299 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 QTRT1Q9BXR0 403 aaKnown RBP9.99□□□□□ -0.81
SCN3B-205ENST00000528267 GON7Q9BXV9 100 aa9.99□□□□□ -0.81
SCN3B-205ENST00000528267 TMEM14BQ9NUH8 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms