RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 DNAH1Q9P2D7 4330 aa19.44■□□□□ 0.7
TRIM3-206ENST00000528227 TRAV18A0A075B6X5 111 aa19.44■□□□□ 0.7
TRIM3-206ENST00000528227 HIST1H1BP16401 226 aaKnown RBP19.44■□□□□ 0.7
TRIM3-206ENST00000528227 MXD1Q05195 221 aa19.44■□□□□ 0.7
TRIM3-206ENST00000528227 HOGA1Q86XE5 327 aa19.44■□□□□ 0.7
TRIM3-206ENST00000528227 SPAG16Q8N0X2 631 aa19.44■□□□□ 0.7
TRIM3-206ENST00000528227 IGLV11-55A0A075B6I3 123 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 TMEM213A2RRL7 107 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 A8MWP6 167 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 PPYP01298 95 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 REG1AP05451 166 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 ZBTB34Q8NCN2 500 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 AIFM2Q9BRQ8 373 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 RNF167Q9H6Y7 350 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 SELENOKQ9Y6D0 94 aa19.43■□□□□ 0.7
TRIM3-206ENST00000528227 RBFOX2O43251 390 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM3-206ENST00000528227 DEFA4P12838 97 aa19.42■□□□□ 0.7
TRIM3-206ENST00000528227 FAM106AQ4KMX7 169 aa19.42■□□□□ 0.7
TRIM3-206ENST00000528227 IL17DQ8TAD2 202 aa19.42■□□□□ 0.7
TRIM3-206ENST00000528227 YTHDF1Q9BYJ9 559 aaKnown RBP19.42■□□□□ 0.7
TRIM3-206ENST00000528227 HRASLSQ9HDD0 168 aa19.42■□□□□ 0.7
TRIM3-206ENST00000528227 MLXQ9UH92 298 aa19.42■□□□□ 0.7
TRIM3-206ENST00000528227 A0A0A6YYH2 397 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 ZNF320A2RRD8 509 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 A6NJ64 397 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 SULT1C2O00338 296 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 OR2B8PP59922 312 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 IDNKQ5T6J7 187 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 ZNF57Q68EA5 555 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-206ENST00000528227 ZNF773Q6PK81 442 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 TMEM61Q8N0U2 210 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 SLC5A7Q9GZV3 580 aa19.41■□□□□ 0.7
TRIM3-206ENST00000528227 TRBV7-1A0A0A6YYK4 115 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 MFSD2BA6NFX1 497 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 TAS2R31P59538 309 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 POU2AF1Q16633 256 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 SLC16A13Q7RTY0 426 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 UXS1Q8NBZ7 420 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 CXorf58Q96LI9 332 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 Q9H521 79 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 AUNIPQ9H7T9 357 aa19.4■□□□□ 0.7
TRIM3-206ENST00000528227 HPRT1P00492 218 aa19.39■□□□□ 0.69
TRIM3-206ENST00000528227 CLEC3BP05452 202 aa19.39■□□□□ 0.69
TRIM3-206ENST00000528227 CATR1Q13166 79 aa19.39■□□□□ 0.69
TRIM3-206ENST00000528227 EPPK1P58107 5090 aaKnown RBP19.39■□□□□ 0.69
TRIM3-206ENST00000528227 TRAV3A0A0B4J244 114 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 LOC100506127A0A0U1RQW1 187 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 IGLC7A0M8Q6 106 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 UPK2O00526 184 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 ATP6V1G2O95670 118 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 FCER2P06734 321 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 NQO2P16083 231 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 FXYD4P59646 89 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 UNQ9165/PRO28630Q6UXU0 137 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 ZNF818PQ6ZRF7 136 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 GIMAP1Q8WWP7 306 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 DIABLOQ9NR28 239 aa19.38■□□□□ 0.69
TRIM3-206ENST00000528227 TM4SF20Q53R12 229 aa19.37■□□□□ 0.69
TRIM3-206ENST00000528227 OR5AP2Q8NGF4 316 aa19.37■□□□□ 0.69
TRIM3-206ENST00000528227 OR52B4Q8NGK2 314 aa19.37■□□□□ 0.69
TRIM3-206ENST00000528227 ZNF502Q8TBZ5 544 aa19.37■□□□□ 0.69
TRIM3-206ENST00000528227 SRSF8Q9BRL6 282 aaKnown RBP19.37■□□□□ 0.69
TRIM3-206ENST00000528227 SCAF4O95104 1147 aaKnown RBP19.36■□□□□ 0.69
TRIM3-206ENST00000528227 BTNL8Q6UX41 500 aa19.36■□□□□ 0.69
TRIM3-206ENST00000528227 COMMD5Q9GZQ3 224 aa19.36■□□□□ 0.69
TRIM3-206ENST00000528227 PLEKHA2Q9HB19 425 aa19.36■□□□□ 0.69
TRIM3-206ENST00000528227 TMEM140Q9NV12 185 aa19.36■□□□□ 0.69
TRIM3-206ENST00000528227 JTBO76095 146 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 S1PR2O95136 353 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 FGF2P09038 288 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 C8orf88P0DMB2 117 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 GPR183P32249 361 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 CBX5P45973 191 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 TMEM17Q86X19 198 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 OR51H1Q8NH63 302 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 CD300LFQ8TDQ1 290 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 MARC2Q969Z3 335 aa19.35■□□□□ 0.69
TRIM3-206ENST00000528227 ANKRD55Q3KP44 614 aa19.34■□□□□ 0.69
TRIM3-206ENST00000528227 AADACL3Q5VUY0 350 aa19.34■□□□□ 0.69
TRIM3-206ENST00000528227 DMBX1Q8NFW5 382 aa19.34■□□□□ 0.69
TRIM3-206ENST00000528227 QTRT1Q9BXR0 403 aaKnown RBP19.34■□□□□ 0.69
TRIM3-206ENST00000528227 THYN1Q9P016 225 aa19.34■□□□□ 0.69
TRIM3-206ENST00000528227 HYDINQ4G0P3 5121 aa19.34■□□□□ 0.69
TRIM3-206ENST00000528227 MEIS3P1A6NDR6 274 aa19.33■□□□□ 0.68
TRIM3-206ENST00000528227 PTBP1P26599 531 aaKnown RBP eCLIP19.33■□□□□ 0.68
TRIM3-206ENST00000528227 OR10W1Q8NGF6 305 aa19.33■□□□□ 0.68
TRIM3-206ENST00000528227 GGTLC1Q9BX51 225 aa19.33■□□□□ 0.68
TRIM3-206ENST00000528227 COMMD9Q9P000 198 aa19.33■□□□□ 0.68
TRIM3-206ENST00000528227 MRPL27Q9P0M9 148 aaKnown RBP19.33■□□□□ 0.68
TRIM3-206ENST00000528227 TRAV25A0A0B4J276 109 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 TMEM127O75204 238 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 GNRHRP30968 328 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 ELLP55199 621 aaPredicted RBP19.32■□□□□ 0.68
TRIM3-206ENST00000528227 NEDD8Q15843 81 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 ZNF585BQ52M93 769 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 PLET1Q6UQ28 207 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 ZNF436Q9C0F3 470 aaPredicted RBP19.32■□□□□ 0.68
TRIM3-206ENST00000528227 UFC1Q9Y3C8 167 aa19.32■□□□□ 0.68
TRIM3-206ENST00000528227 LOC102724200A0A096LPH7 203 aaPredicted RBP19.31■□□□□ 0.68
TRIM3-206ENST00000528227 IGHV3-35A0A0C4DH35 117 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms