RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PSMB6P28072 239 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 SYNJ2BPP57105 145 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 TSPAN5P62079 268 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 C15orf32Q32M92 178 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 VAX1Q5SQQ9 334 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 DGCR14Q96DF8 476 aaKnown RBP25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 SIGLEC8Q9NYZ4 499 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 SMAD5-AS1Q9Y6J3 95 aa25.26■■□□□ 1.63
SSSCA1-205ENST00000527920 CGB1A6NKQ9 187 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 GP9P14770 177 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 AREGP15514 252 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 CTRB1P17538 263 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 OR2B8PP59922 312 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 ERVK-16P61578 105 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 CTRB2Q6GPI1 263 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 DMBX1Q8NFW5 382 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 C15orf40Q8WUR7 153 aa25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 FAM212BQ9NTI7 297 aaPredicted RBP25.25■■□□□ 1.63
SSSCA1-205ENST00000527920 MARCH11A6NNE9 402 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 BMPR1BO00238 502 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 OR2J3O76001 311 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 IL34Q6ZMJ4 242 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 FANCD2OSQ96PS1 177 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 COMMD5Q9GZQ3 224 aa25.24■■□□□ 1.63
SSSCA1-205ENST00000527920 HIST1H1BP16401 226 aaKnown RBP25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 S100GP29377 79 aa25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 UCP3P55916 312 aa25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 THOC7Q6I9Y2 204 aaKnown RBP25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 C11orf87Q6NUJ2 197 aa25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 EXTL2Q9UBQ6 330 aa25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 FBXL7Q9UJT9 491 aa25.23■■□□□ 1.63
SSSCA1-205ENST00000527920 TRAV3A0A0B4J244 114 aa25.22■■□□□ 1.63
SSSCA1-205ENST00000527920 BCL7BQ9BQE9 202 aa25.22■■□□□ 1.63
SSSCA1-205ENST00000527920 RSRP1Q9BUV0 290 aa25.22■■□□□ 1.63
SSSCA1-205ENST00000527920 IGLC7A0M8Q6 106 aa25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 MYOD1P15172 320 aa25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 ZNF585BQ52M93 769 aa25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 SLC38A6Q8IZM9 456 aa25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 FCAMRQ8WWV6 532 aa25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 QTRT1Q9BXR0 403 aaKnown RBP25.21■■□□□ 1.63
SSSCA1-205ENST00000527920 TBPP20226 339 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 LPAR6P43657 344 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 C19orf35Q6ZS72 473 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 HSD17B13Q7Z5P4 300 aaPredicted RBP25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 RAB2BQ8WUD1 216 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 PEMTQ9UBM1 199 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 KLK11Q9UBX7 282 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 MTFP1Q9UDX5 166 aa25.2■■□□□ 1.62
SSSCA1-205ENST00000527920 DMRT1Q9Y5R6 373 aa25.19■■□□□ 1.62
SSSCA1-205ENST00000527920 IGLV11-55A0A075B6I3 123 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 CSN3P07498 182 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 SPCS2Q15005 226 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 PHLDA2Q53GA4 152 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 ARRDC1Q8N5I2 433 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 OR52I2Q8NH67 350 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 ABHD1Q96SE0 405 aa25.18■■□□□ 1.62
SSSCA1-205ENST00000527920 H0Y980 276 aa25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 NDUFB8O95169 186 aa25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 DEFA4P12838 97 aa25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 RNASE10Q5GAN6 216 aaKnown RBP25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 HAPLN4Q86UW8 402 aa25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 MIXL1Q9H2W2 232 aa25.17■■□□□ 1.62
SSSCA1-205ENST00000527920 M0QYG6 137 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 KRASP01116 189 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 IFNA6P05013 189 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 TMBIM6P55061 237 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 CLVS1Q8IUQ0 354 aaPredicted RBP25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 OR1L8Q8NGR8 309 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 CCDC140Q96MF4 163 aa25.16■■□□□ 1.62
SSSCA1-205ENST00000527920 GGCTO75223 188 aaKnown RBP25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 REG1AP05451 166 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 TRAPPC2P0DI81 140 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 TRAPPC2BP0DI82 140 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 PTBP1P26599 531 aaKnown RBP eCLIP25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 TBC1D26Q86UD7 250 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 EEF1AKMT3Q96AZ1 226 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 CXorf58Q96LI9 332 aa25.15■■□□□ 1.62
SSSCA1-205ENST00000527920 RPA2P15927 270 aa25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 MRPS10P82664 201 aaKnown RBP25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 LHFPL1Q86WI0 220 aa25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 ZNF486Q96H40 463 aaPredicted RBP25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 TSC22D3Q99576 134 aa25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 CCDC59Q9P031 241 aaKnown RBP25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 PRNDQ9UKY0 176 aa25.14■■□□□ 1.62
SSSCA1-205ENST00000527920 TRBV7-1A0A0A6YYK4 115 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 TEX50A0A1B0GTY4 177 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 RGS5O15539 181 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 SNAPC5O75971 98 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 CD3DP04234 171 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 G6PCP35575 357 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 MECP2P51608 486 aaKnown RBP25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 RND3P61587 244 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 SSBP1Q04837 148 aaKnown RBP25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 RNASE12Q5GAN4 147 aaKnown RBP25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 LAX1Q8IWV1 398 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 GDPD1Q8N9F7 314 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 OR2K2Q8NGT1 345 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 NDUFA4L2Q9NRX3 87 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 THYN1Q9P016 225 aa25.13■■□□□ 1.61
SSSCA1-205ENST00000527920 PPP5D1E7EU14 171 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms