RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 LOC102723971A0A1B0GUV8 181 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 S100PP25815 95 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 HAGHQ16775 308 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 WDR25Q64LD2 544 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 MBD3L1Q8WWY6 194 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 RHOVQ96L33 236 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 P2RX4Q99571 388 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM133Q9H2Q1 129 aa13.23□□□□□ -0.29
SNRNP35-204ENST00000527158 PPIAL4CA0A0B4J2A2 164 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 A0A1B0GV50 99 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 LY86O95711 162 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 PPIAL4GP0DN37 164 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 CDKN1AP38936 164 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 OR2B8PP59922 312 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 PMS2P11Q13670 270 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 AARDQ4LEZ3 155 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 FAM71F2Q6NXP2 309 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 C11orf42Q8N5U0 333 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 OR51M1Q9H341 326 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM242Q9NWH2 141 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 NDUFS6O75380 124 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 IFNA1P01562 189 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 APOA2P02652 100 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 SPCS3P61009 180 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 THNSL2Q86YJ6 484 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 OR52E5Q8NH55 327 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 C8orf46Q8TAG6 207 aa13.22□□□□□ -0.29
SNRNP35-204ENST00000527158 RBP4P02753 201 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 FABP1P07148 127 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 IL3RAP26951 378 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 GNB2P62879 340 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 DLK1P80370 383 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 RELBQ01201 579 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 TMEM14EPQ6UXP3 125 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 LILRB2Q8N423 598 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 ZDHHC16Q969W1 377 aa13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 MRPL20Q9BYC9 149 aaKnown RBP13.21□□□□□ -0.29
SNRNP35-204ENST00000527158 RPS10P46783 165 aaKnown RBP13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 PRRX1P54821 245 aa13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 POU2AF1Q16633 256 aa13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 OR4A47Q6IF82 309 aa13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 TNFRSF14Q92956 283 aa13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.3
SNRNP35-204ENST00000527158 LIPFP07098 398 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 GPR6P46095 362 aaPredicted RBP13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 RUNX1Q01196 453 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 TIMM9Q9Y5J7 89 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 GOSR1O95249 250 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 BCL2P10415 239 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 HOXA5P20719 270 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 EFNA4P52798 201 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 ARL16Q0P5N6 197 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 LRRC75BQ2VPJ9 315 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 OR8G2PQ6IF36 304 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 RBMS3Q6XE24 437 aaKnown RBP13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 OR5AN1Q8NGI8 311 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
SNRNP35-204ENST00000527158 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 REG1BP48304 166 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 ZNF137PP52743 207 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 ELOBQ15370 118 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 PDLIM3Q53GG5 364 aaPredicted RBP13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 ZNF787Q6DD87 383 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 HAPLN4Q86UW8 402 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 ZNF525Q8N782 197 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 ST6GALNAC6Q969X2 333 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 OR4C12Q96R67 309 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 IGSF10Q6WRI0 2623 aa13.19□□□□□ -0.3
SNRNP35-204ENST00000527158 IGHV2-26A0A0B4J1V2 119 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 H0YJW9 148 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 PRB1P04280 392 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 SLC38A11Q08AI6 406 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 TGIF2LXQ8IUE1 241 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 OR10P1Q8NGE3 313 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 SSBP3Q9BWW4 388 aaPredicted RBP13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CLEC7AQ9BXN2 247 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 FOXA2Q9Y261 457 aaPredicted RBP13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CACNA1BQ00975 2339 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CLN5O75503 358 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 LHX4Q969G2 390 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 FLYWCH2Q96CP2 140 aaKnown RBP13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 NABP2Q9BQ15 211 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 PCGF1Q9BSM1 259 aa13.18□□□□□ -0.3
SNRNP35-204ENST00000527158 CTDSP1Q9GZU7 261 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms