RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 MZT2BQ6NZ67 158 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 SLC35G3Q8N808 338 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 RNF152Q8N8N0 203 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 LFNGQ8NES3 379 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 OR5AU1Q8NGC0 362 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 VSTM2AQ8TAG5 236 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 SRSF12Q8WXF0 261 aaKnown RBP8.42□□□□□ -1.06
NEDD8-205ENST00000527046 ARPC1AQ92747 370 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 IL22RA2Q969J5 263 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 KLK15Q9H2R5 256 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 NUDT15Q9NV35 164 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 KLK9Q9UKQ9 250 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 KCNIP3Q9Y2W7 256 aa8.42□□□□□ -1.06
NEDD8-205ENST00000527046 TRAV41A0A0B4J266 112 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 KCNAB3O43448 404 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 IGHG4P01861 327 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 OPN1MWP04001 364 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 OPN1MW2P0DN77 364 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 OPN1MW3P0DN78 364 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 HLA-GP17693 338 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 PSMB8P28062 276 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 MAS1LP35410 378 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 RAB25P57735 213 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 LCNL1Q6ZST4 164 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 LYG2Q86SG7 212 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 OR10W1Q8NGF6 305 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 MYOZ3Q8TDC0 251 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 CHPT1Q8WUD6 406 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
NEDD8-205ENST00000527046 SEC22CQ9BRL7 303 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 AIFM2Q9BRQ8 373 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 PARP11Q9NR21 331 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 NDUFA4L2Q9NRX3 87 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 DMRT1Q9Y5R6 373 aa8.41□□□□□ -1.06
NEDD8-205ENST00000527046 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 IGLC7A0M8Q6 106 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 C15orf61A6NNL5 157 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 MPTX1A8MV57 137 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 PITX3O75364 302 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 AREGP15514 252 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 GNB1P62873 340 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 TRIM16LQ309B1 348 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 C18orf65Q6ZTR6 163 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 H2BFWTQ7Z2G1 175 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 CENPVQ7Z7K6 275 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-205ENST00000527046 ZNF429Q86V71 674 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 FOXRED2Q8IWF2 684 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 LGI3Q8N145 548 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 SPATA3Q8NHX4 192 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 GRPEL2Q8TAA5 225 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 CASTOR1Q8WTX7 329 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
NEDD8-205ENST00000527046 QTRT1Q9BXR0 403 aaKnown RBP8.4□□□□□ -1.06
NEDD8-205ENST00000527046 PALMDQ9NP74 551 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
NEDD8-205ENST00000527046 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 ADAP1O75689 374 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 CNIH1O95406 144 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 BRI3O95415 125 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 DUS4LO95620 317 aaKnown RBP8.39□□□□□ -1.07
NEDD8-205ENST00000527046 IL5P05113 134 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 CRYGCP07315 174 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 APELAP0DMC3 54 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 VDAC1P21796 283 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 VAMP1P23763 118 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 RPL27AP46776 148 aaKnown RBP8.39□□□□□ -1.07
NEDD8-205ENST00000527046 MFAP2P55001 183 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 ERVK-16P61578 105 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 WT1-ASQ06250 92 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 C2orf68Q2NKX9 166 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 C12orf54Q6X4T0 127 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 ZNF695Q8IW36 515 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 OR5T1Q8NG75 326 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 CITED2Q99967 270 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-205ENST00000527046 FOXA2Q9Y261 457 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-205ENST00000527046 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
NEDD8-205ENST00000527046 TRBV9A0A0B4J1U6 114 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 INMT-MINDY4F8WBC2 141 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 ELANEP08246 267 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 CTRB1P17538 263 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 FOXE3Q13461 319 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 DCTN2Q13561 401 aaKnown RBP8.38□□□□□ -1.07
NEDD8-205ENST00000527046 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
NEDD8-205ENST00000527046 PDLIM3Q53GG5 364 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms