RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 WFDC1Q9HC57 220 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 HILPDAQ9Y5L2 63 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 POLQO75417 2590 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 INS-IGF2F8WCM5 200 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 NPFFO15130 113 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 MAS1LP35410 378 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 HOXA1P49639 335 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 ATP5IP56385 69 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 TMEM267Q0VDI3 215 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 PSG5Q15238 335 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 CLLU1Q5K131 121 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 CLEC9AQ6UXN8 241 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 PDZD9Q8IXQ8 264 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 ATP5SQ99766 215 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 ENY2Q9NPA8 101 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 HEYLQ9NQ87 328 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 AUP1Q9Y679 476 aa16.48■□□□□ 0.23
SMCO4-203ENST00000526869 ASH1LQ9NR48 2969 aaKnown RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 GCN1Q92616 2671 aaKnown RBP16.48■□□□□ 0.23
SMCO4-203ENST00000526869 CENPVL3A0A0U1RRI6 287 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 TEX50A0A1B0GTY4 177 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 A0A1W2PRD5 423 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 A0A1W2PRF3 423 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 A0A1W2PRM7 423 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 SLC25A17O43808 307 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 METTL15P1P0C7V9 234 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 RAB14P61106 215 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 EBI3Q14213 229 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 SSX2Q16385 188 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 THNSL2Q86YJ6 484 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 MMD2Q8IY49 270 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 OR1L8Q8NGR8 309 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 AJUBAQ96IF1 538 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 RITA1Q96K30 269 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 GINS3Q9BRX5 216 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 COMMD5Q9GZQ3 224 aa16.47■□□□□ 0.23
SMCO4-203ENST00000526869 SETXQ7Z333 2677 aaKnown RBP16.46■□□□□ 0.23
SMCO4-203ENST00000526869 IGHV1-69DA0A0B4J2H0 117 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 J3QLI3 93 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 MOSP00540 346 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 IGHV1-69P01742 117 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 SAA4P35542 130 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 HTR2BP41595 481 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 ATP6V1FQ16864 119 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 SPINK9Q5DT21 86 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 HAPLN4Q86UW8 402 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 OR2T10Q8NGZ9 312 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 RBMXL1Q96E39 390 aaKnown RBP16.46■□□□□ 0.23
SMCO4-203ENST00000526869 REG4Q9BYZ8 158 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 ZNF430Q9H8G1 570 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-203ENST00000526869 PLEKHA3Q9HB20 300 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 SIGLEC9Q9Y336 463 aa16.46■□□□□ 0.23
SMCO4-203ENST00000526869 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 C15orf62A8K5M9 175 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 CLINT1Q14677 625 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 PRSS8Q16651 343 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 DYNAPQ8N1N2 210 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 TMEM217Q8N7C4 229 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 NPBQ8NG41 125 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 PINX1Q96BK5 328 aaKnown RBP16.45■□□□□ 0.22
SMCO4-203ENST00000526869 PARD6GQ9BYG4 376 aaPredicted RBP16.45■□□□□ 0.22
SMCO4-203ENST00000526869 NDUFA4L2Q9NRX3 87 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 HIF1ANQ9NWT6 349 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 WNK2Q9Y3S1 2297 aa16.45■□□□□ 0.22
SMCO4-203ENST00000526869 MED13LQ71F56 2210 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 A0A1W2PN81 502 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 PMS2P5A8MQ11 134 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 NDUFA3O95167 84 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 IGKV1D-33P01593 117 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 IGKV1-33P01594 117 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 CHRNA7P36544 502 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 SLC38A11Q08AI6 406 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 ARL16Q0P5N6 197 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 MRGPRG-AS1Q2M3A8 158 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 HIST2H2BCQ6DN03 193 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 KRTAP1-3Q8IUG1 177 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 Q8N6K4 173 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 LRRC20Q8TCA0 184 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 EAF1Q96JC9 268 aaPredicted RBP16.44■□□□□ 0.22
SMCO4-203ENST00000526869 C7orf69Q9H7B7 122 aa16.44■□□□□ 0.22
SMCO4-203ENST00000526869 METTL1Q9UBP6 276 aaKnown RBP16.44■□□□□ 0.22
SMCO4-203ENST00000526869 TET2Q6N021 2002 aaPredicted RBP16.44■□□□□ 0.22
SMCO4-203ENST00000526869 RRHO14718 337 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 IFNA10P01566 189 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 SEC11BP0C7V7 166 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 MYOD1P15172 320 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 BRS3P32247 399 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 F2RL1P55085 397 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 PPP1R27Q86WC6 154 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 MRPL41Q8IXM3 137 aaKnown RBP16.43■□□□□ 0.22
SMCO4-203ENST00000526869 OR10P1Q8NGE3 313 aa16.43■□□□□ 0.22
SMCO4-203ENST00000526869 RNF223E7ERA6 249 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 NBR2O15453 112 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 IFNA5P01569 189 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 SNRNP70P08621 437 aaKnown RBP16.42■□□□□ 0.22
SMCO4-203ENST00000526869 OR8U8P0C7N1 319 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 CNTFRP26992 372 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 RAB11AP62491 216 aa16.42■□□□□ 0.22
SMCO4-203ENST00000526869 BSXQ3C1V8 233 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms