RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 METTL8Q9H825 291 aaKnown RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 HEXA-AS1Q9H8Q6 139 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 LINC00574Q9H8X3 128 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 OR2S2Q9NQN1 319 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 NECAP2Q9NVZ3 263 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 CALYQ9NYX4 217 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 IDI2-AS1Q9NZ38 188 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 ZNF107Q9UII5 783 aaPredicted RBP3.57□□□□□ -1.84
USP48-211ENST00000526044 KPTNQ9Y664 436 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 FBN2P35556 2912 aa3.57□□□□□ -1.84
USP48-211ENST00000526044 PDZD2O15018 2839 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TRBV6-7A0A0A0MS04 114 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 IGHV3-43A0A0B4J1X8 118 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TRAV25A0A0B4J276 109 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 ANKRD20A5PA0PJZ0 165 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CENPXA8MT69 81 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 DISC1C4P0D8 188 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 J3QLI3 93 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 J3QRK9 145 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TOR1AO14656 332 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 BET1O15155 118 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 UPK1BO75841 260 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 MMP23AO75900 390 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 RAB3DO95716 219 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 MBP02144 154 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 RBP4P02753 201 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CD3DP04234 171 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 OR5H8P0DN80 308 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 IGHV1-8P0DP01 117 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 IGHV3-43DP0DP04 118 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 IL7P13232 177 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CD99P14209 185 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TBPP20226 339 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 FCGR2CP31995 323 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 SSTR5P35346 364 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 FAUP35544 74 aaKnown RBP3.56□□□□□ -1.84
USP48-211ENST00000526044 DLX6P56179 175 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 AP3S2P59780 193 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 HILS1P60008 231 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 SEC61GP60059 68 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 HLA-DRB3P79483 266 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 MEF2DQ14814 521 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CDK10Q15131 360 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 SSX2Q16385 188 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 ACTBL2Q562R1 376 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 RNASE10Q5GAN6 216 aaKnown RBP3.56□□□□□ -1.84
USP48-211ENST00000526044 LY6G6FQ5SQ64 297 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 FAM159AQ6UWV7 190 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 HEPN1Q6WQI6 88 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TCF23Q7RTU1 214 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 VMO1Q7Z5L0 202 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 LHFPL4Q7Z7J7 247 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TMEM17Q86X19 198 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 KIR3DL3Q8N743 410 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 Q8N7P7 452 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 OR13D1Q8NGV5 346 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 OR9G1Q8NH87 305 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CHPT1Q8WUD6 406 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 MITD1Q8WV92 249 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 DEDD2Q8WXF8 326 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 BORCS5Q969J3 196 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 MOB3AQ96BX8 217 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 GINS4Q9BRT9 223 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 CHRDL1Q9BU40 450 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 SUCNR1Q9BXA5 334 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TMEM133Q9H2Q1 129 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 GEMIN7Q9H840 131 aaKnown RBP3.56□□□□□ -1.84
USP48-211ENST00000526044 ABCB10Q9NRK6 738 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 EHFQ9NZC4 300 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 GNG12Q9UBI6 72 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 TBC1D24Q9ULP9 559 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 ANAPC10Q9UM13 185 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 RBMX2Q9Y388 322 aaKnown RBP3.56□□□□□ -1.84
USP48-211ENST00000526044 RBM7Q9Y580 266 aaKnown RBP3.56□□□□□ -1.84
USP48-211ENST00000526044 AUP1Q9Y679 476 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 AKAP6Q13023 2319 aa3.56□□□□□ -1.84
USP48-211ENST00000526044 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 LRRK2Q5S007 2527 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 MALRD1Q5VYJ5 2156 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 APCP25054 2843 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 TRAV26-1A0A087WT03 109 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 IGKV1-6A0A0C4DH72 117 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CENPVL3A0A0U1RRI6 287 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 FAM240BA0A1B0GVZ2 78 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 A0A1W2PPE3 182 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 ITGB1BP1O14713 200 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CD5LO43866 347 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 IGHV3-7P01780 117 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CD74P04233 296 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 NFYAP23511 347 aaPredicted RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 COX7A1P24310 79 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 CD34P28906 385 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 HRH1P35367 487 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 PPP1CCP36873 323 aaKnown RBP3.55□□□□□ -1.84
USP48-211ENST00000526044 UBE2E1P51965 193 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 DLX1P56177 255 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
USP48-211ENST00000526044 HERV-K104P61576 105 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms