RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ARHGEF12Q9NZN5 1544 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 KDM6BO15054 1643 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 EIF2AK4Q9P2K8 1649 aaKnown RBP2.31□□□□□ -2.04
CSDE1-211ENST00000525970 DOCK5Q9H7D0 1870 aa2.31□□□□□ -2.04
CSDE1-211ENST00000525970 GRIFINA4D1Z8 144 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 SERPINA1P01009 418 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 GABRA2P47869 451 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 SNRPD2P62316 118 aaKnown RBP2.3□□□□□ -2.04
CSDE1-211ENST00000525970 HIST1H3AP68431 136 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 H3F3AP84243 136 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 PSG4Q00888 419 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 GUK1Q16774 197 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.3□□□□□ -2.04
CSDE1-211ENST00000525970 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 CCDC121Q6ZUS5 278 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 GLT6D1Q7Z4J2 308 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF283Q8N7M2 679 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 GPR119Q8TDV5 335 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 TVP23CQ96ET8 276 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 CAPZA3Q96KX2 299 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 DAPK1P53355 1430 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ARHGAP31Q2M1Z3 1444 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ERCC6Q03468 1493 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 TCOF1Q13428 1488 aaKnown RBP2.3□□□□□ -2.04
CSDE1-211ENST00000525970 MBD5Q9P267 1494 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ASXL1Q8IXJ9 1541 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 UGGT2Q9NYU1 1516 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 SHROOM2Q13796 1616 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ADGBQ8N7X0 1667 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 ITSN2Q9NZM3 1697 aa2.3□□□□□ -2.04
CSDE1-211ENST00000525970 CC2D2AQ9P2K1 1620 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 KDM5DQ9BY66 1539 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 SCAF11Q99590 1463 aaKnown RBP2.29□□□□□ -2.04
CSDE1-211ENST00000525970 UHRF1BP1Q6BDS2 1440 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 NUP155O75694 1391 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 IGLV10-54A0A075B6I4 117 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 KNCNA6PVL3 124 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 ZNF878C9JN71 531 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 H3BQV1 296 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 TP53I11O14683 189 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 CYBAP13498 195 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 RPL27AP46776 148 aaKnown RBP2.29□□□□□ -2.04
CSDE1-211ENST00000525970 RPL5P46777 297 aaKnown RBP2.29□□□□□ -2.04
CSDE1-211ENST00000525970 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 GLO1Q04760 184 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 BAMBIQ13145 260 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 SNCBQ16143 134 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 IAH1Q2TAA2 248 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-211ENST00000525970 PYDC2Q56P42 97 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 FAM173BQ6P4H8 233 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 C2orf91Q6ZV80 131 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 S100A7AQ86SG5 101 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 MSRB3Q8IXL7 192 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 OR10X1Q8NGY0 326 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 CMTM2Q8TAZ6 248 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 DYDC1Q8WWB3 177 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 ERMAPQ96PL5 475 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-211ENST00000525970 TSPAN32Q96QS1 320 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 NMNAT3Q96T66 252 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 AICDAQ9GZX7 198 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 ARL2BPQ9Y2Y0 163 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 HSPE1-MOB4S4R3N1 261 aa2.29□□□□□ -2.04
CSDE1-211ENST00000525970 LTBP2Q14767 1821 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 SLX4Q8IY92 1834 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 UNC13AQ9UPW8 1703 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 SAMD9Q5K651 1589 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 OR4C46A6NHA9 309 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 FAAHO00519 579 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 UBE2L6O14933 153 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-211ENST00000525970 IGLV6-57P01721 117 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 HLA-DRB1P01911 266 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 P0C880 135 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 FAM236CP0DP71 79 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 GZMBP10144 247 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 XCL1P47992 114 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 RWDD2BP57060 319 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 TAS2R30P59541 319 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 GNG11P61952 73 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 POLR2GP62487 172 aaKnown RBP eCLIP2.28□□□□□ -2.04
CSDE1-211ENST00000525970 GNGT1P63211 74 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 CDK10Q15131 360 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 SPA17Q15506 151 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 OR8B12Q8NGG6 310 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 BORCS7Q96B45 105 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 TRIM4Q9C037 500 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 MYO16Q9Y6X6 1858 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 MAST2Q6P0Q8 1798 aa2.28□□□□□ -2.04
CSDE1-211ENST00000525970 WDR90Q96KV7 1748 aa2.28□□□□□ -2.05
CSDE1-211ENST00000525970 KDM5AP29375 1690 aaKnown RBP2.28□□□□□ -2.05
CSDE1-211ENST00000525970 NESP48681 1621 aa2.28□□□□□ -2.05
CSDE1-211ENST00000525970 SYNMO15061 1565 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 LAMC3Q9Y6N6 1575 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
CSDE1-211ENST00000525970 DENND4BO75064 1496 aaPredicted RBP2.27□□□□□ -2.05
CSDE1-211ENST00000525970 PZPP20742 1482 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms