RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 NDUFS7O75251 213 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 LIPFP07098 398 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 PLA2G5P39877 138 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 LCN15Q6UWW0 184 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 C8orf46Q8TAG6 207 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 NPCDR1Q9BY65 106 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
BEST1-204ENST00000524926 IGHV3-72A0A0B4J1Y9 119 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 C22orf46C9J442 243 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
BEST1-204ENST00000524926 HAGHQ16775 308 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 CENPVQ7Z7K6 275 aaPredicted RBP12.39□□□□□ -0.43
BEST1-204ENST00000524926 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
BEST1-204ENST00000524926 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 TEX50A0A1B0GTY4 177 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 NPY1RP25929 384 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 MC5RP33032 325 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 RAB13P51153 203 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
BEST1-204ENST00000524926 PCGF1Q9BSM1 259 aa12.39□□□□□ -0.43
BEST1-204ENST00000524926 SSBP3Q9BWW4 388 aaPredicted RBP12.39□□□□□ -0.43
BEST1-204ENST00000524926 CA2P00918 260 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
BEST1-204ENST00000524926 ARF6P62330 175 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 ZNF726P1Q15940 193 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 COMMD5Q9GZQ3 224 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 ARHGAP32A7KAX9 2087 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 A6NNC1 897 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 SNAPINO95295 136 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 RBP4P02753 201 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
BEST1-204ENST00000524926 FFAR4Q5NUL3 377 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 KPTNQ9Y664 436 aa12.38□□□□□ -0.43
BEST1-204ENST00000524926 LOC105371242A0A075B767 164 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 A0A1B0GW64 132 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
BEST1-204ENST00000524926 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
BEST1-204ENST00000524926 SP5Q6BEB4 398 aaPredicted RBP12.37□□□□□ -0.43
BEST1-204ENST00000524926 SSX7Q7RTT5 188 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 PNKDQ8N490 385 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 GGACTQ9BVM4 153 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 SLC35B3Q9H1N7 401 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 INSIG2Q9Y5U4 225 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 TACC2O95359 2948 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 IGKV1D-33P01593 117 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 IGKV1-33P01594 117 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 OR13C7P0DN81 318 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 IGFBP2P18065 325 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
BEST1-204ENST00000524926 RPP25LQ8N5L8 163 aaKnown RBP12.37□□□□□ -0.43
BEST1-204ENST00000524926 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 MBD3L1Q8WWY6 194 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 SIRT7Q9NRC8 400 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 SLC39A9Q9NUM3 307 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
BEST1-204ENST00000524926 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 TSPAN4O14817 238 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 MBP02144 154 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 USF1P22415 310 aaPredicted RBP12.36□□□□□ -0.43
BEST1-204ENST00000524926 TREML4Q6UXN2 200 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 RITA1Q96K30 269 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 GNG13Q9P2W3 67 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 SLC25A17O43808 307 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 NPBWR1P48145 328 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 OR10W1Q8NGF6 305 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 CLDND2Q8NHS1 167 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 RPEQ96AT9 228 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 SMDT1Q9H4I9 107 aa12.36□□□□□ -0.43
BEST1-204ENST00000524926 CFAP46Q8IYW2 2715 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 FAM74A7A6NL05 159 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
BEST1-204ENST00000524926 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 EFNA4P52798 201 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 DLK1P80370 383 aa12.35□□□□□ -0.43
BEST1-204ENST00000524926 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms