RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SDHCQ99643 169 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 SLC5A7Q9GZV3 580 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 IFT46Q9NQC8 304 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 DNAH9Q9NYC9 4486 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 MPPED1O15442 326 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 DYRK1AQ13627 763 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 TMEM69Q5SWH9 247 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 C10orf55Q5SWW7 151 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 PUSL1Q8N0Z8 303 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZBTB34Q8NCN2 500 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 TMEM167AQ8TBQ9 72 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 SLC25A46Q96AG3 418 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 RANGRFQ9HD47 186 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 PPP1R14DQ9NXH3 145 aa8.58□□□□□ -1.04
TRAPPC4-204ENST00000524797 TRAV6A0A075B6T7 132 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 TNFSF12O43508 249 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 KBTBD11O94819 623 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR2A4O95047 310 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 LY86O95711 162 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 TNFSF8P32971 234 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 RFX2P48378 723 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 FXYD4P59646 89 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 Q5BKY6 102 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 USMG5Q96IX5 58 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR2A7Q96R45 310 aa8.57□□□□□ -1.04
TRAPPC4-204ENST00000524797 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 CTDSP2O14595 271 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 ACTL6BO94805 426 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 EIF4EP06730 217 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZP3P21754 424 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 HLA-DMAP28067 261 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 TTC9CQ8N5M4 171 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 VSTM2AQ8TAG5 236 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 SPIN2AQ99865 258 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 SPIN2BQ9BPZ2 258 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 PEF1Q9UBV8 284 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 TEX22C9J3V5 150 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 RGS5O15539 181 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 HRASP01112 189 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 PRH1P02810 166 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 MAS1LP35410 378 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 RPL27AP46776 148 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 HERV-K104P61576 105 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 ASAH1Q13510 395 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 KLF5Q13887 457 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 VAX1Q5SQQ9 334 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 SPAG16Q8N0X2 631 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 DEDD2Q8WXF8 326 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 CMTM3Q96MX0 182 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR4C12Q96R67 309 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 ELOVL1Q9BW60 279 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 EHFQ9NZC4 300 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 MBD2Q9UBB5 411 aa8.56□□□□□ -1.04
TRAPPC4-204ENST00000524797 TRBV9A0A0B4J1U6 114 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 SULT1C2O00338 296 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 RBFOX2O43251 390 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 TRBV12-3P01733 135 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 PMP2P02689 132 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 C1QBP02746 253 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 PRSS3P35030 304 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 SSTP61278 116 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 RHOGP84095 191 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 CATR1Q13166 79 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZNF818PQ6ZRF7 136 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 SSX9Q7RTT3 188 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 SLC25A42Q86VD7 318 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 COMMD3Q9UBI1 195 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 COL7A1Q02388 2944 aa8.55□□□□□ -1.04
TRAPPC4-204ENST00000524797 A0A1B0GW64 132 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZNF735P0CB33 412 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 GP9P14770 177 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 TAS2R46P59540 309 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 EXOSC2Q13868 293 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 DHRS11Q6UWP2 260 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 HAPLN4Q86UW8 402 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 TMEM17Q86X19 198 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 OR4A5Q8NH83 315 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 MOB3AQ96BX8 217 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZNF2Q9BSG1 426 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 FXYD6Q9H0Q3 95 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 BET1LQ9NYM9 111 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 E7EUB6 86 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 NHLRC4P0CG21 123 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 MYOD1P15172 320 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 RORCP51449 518 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 TAS2R31P59538 309 aa8.54□□□□□ -1.04
TRAPPC4-204ENST00000524797 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms