RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 FCGR2CP31995 323 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 MSMO1Q15800 293 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 OR4A47Q6IF82 309 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 SPAG16Q8N0X2 631 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 OR52B4Q8NGK2 314 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 OR4A5Q8NH83 315 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 FCGR1BQ92637 280 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 CXorf58Q96LI9 332 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 AIFM2Q9BRQ8 373 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 HRASLSQ9HDD0 168 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 MLXQ9UH92 298 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
HIF3A-208ENST00000524533 ALMS1Q8TCU4 4167 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 TRBV7-1A0A0A6YYK4 115 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 MFSD2BA6NFX1 497 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 PPYP01298 95 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 CATR1Q13166 79 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 SPARTQ8N0X7 666 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 GVQW1Q8N7I0 195 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
HIF3A-208ENST00000524533 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 TRAV18A0A075B6X5 111 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SCAF4O95104 1147 aaKnown RBP12.19□□□□□ -0.46
HIF3A-208ENST00000524533 PTHLHP12272 177 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SDC2P34741 201 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SCAND1P57086 179 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 OR2B8PP59922 312 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 MXD1Q05195 221 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 ANKRD55Q3KP44 614 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 ZBTB34Q8NCN2 500 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 GGTLC1Q9BX51 225 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SLC5A7Q9GZV3 580 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 ETV7Q9Y603 341 aa12.19□□□□□ -0.46
HIF3A-208ENST00000524533 SULT1C2O00338 296 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 CLEC3BP05452 202 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 GPR183P32249 361 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 TAS2R31P59538 309 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 FXYD4P59646 89 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 OR5H6Q8NGV6 325 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 MARC2Q969Z3 335 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 COMMD5Q9GZQ3 224 aa12.18□□□□□ -0.46
HIF3A-208ENST00000524533 LOC102724200A0A096LPH7 203 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-208ENST00000524533 IGLC7A0M8Q6 106 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 HPRT1P00492 218 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 CLEC2LP0C7M8 214 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 NQO2P16083 231 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 UNQ9165/PRO28630Q6UXU0 137 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 ZNF502Q8TBZ5 544 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 THYN1Q9P016 225 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 UFC1Q9Y3C8 167 aa12.17□□□□□ -0.46
HIF3A-208ENST00000524533 A0A0A6YYH2 397 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 TRAV3A0A0B4J244 114 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 A6NJ64 397 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 UPK2O00526 184 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 FCER2P06734 321 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 POU2AF1Q16633 256 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 ZNF585BQ52M93 769 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 IDNKQ5T6J7 187 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 PLET1Q6UQ28 207 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 ZNF818PQ6ZRF7 136 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 RBPMS2Q6ZRY4 209 aaKnown RBP12.16□□□□□ -0.46
HIF3A-208ENST00000524533 TMEM17Q86X19 198 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 DMBX1Q8NFW5 382 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 OR1L6Q8NGR2 347 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 SRSF8Q9BRL6 282 aaKnown RBP12.16□□□□□ -0.46
HIF3A-208ENST00000524533 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 TMEM140Q9NV12 185 aa12.16□□□□□ -0.46
HIF3A-208ENST00000524533 MRPL27Q9P0M9 148 aaKnown RBP12.16□□□□□ -0.46
HIF3A-208ENST00000524533 PLECQ15149 4684 aaKnown RBP12.16□□□□□ -0.46
HIF3A-208ENST00000524533 IGHV3-35A0A0C4DH35 117 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 CYB5BO43169 146 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 S1PR2O95136 353 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 ELLP55199 621 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-208ENST00000524533 AADACL3Q5VUY0 350 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 ZNF773Q6PK81 442 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 QTRT1Q9BXR0 403 aaKnown RBP12.15□□□□□ -0.46
HIF3A-208ENST00000524533 AUNIPQ9H7T9 357 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 DIABLOQ9NR28 239 aa12.15□□□□□ -0.46
HIF3A-208ENST00000524533 TGOLN2O43493 480 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 FGF2P09038 288 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 PTBP1P26599 531 aaKnown RBP eCLIP12.14□□□□□ -0.47
HIF3A-208ENST00000524533 CBX5P45973 191 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 HERV-K104P61576 105 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 THOC7Q6I9Y2 204 aaKnown RBP12.14□□□□□ -0.47
HIF3A-208ENST00000524533 GDPD1Q8N9F7 314 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
HIF3A-208ENST00000524533 CD300LFQ8TDQ1 290 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms