RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 GIMAP1Q8WWP7 306 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 PGLYRP3Q96LB9 341 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 ATP6V0BQ99437 205 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 OAZ3Q9UMX2 235 aa12.47□□□□□ -0.41
PVT1-220ENST00000524165 VPS13BQ7Z7G8 4022 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 SOCS1O15524 211 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 FABP7O15540 132 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 LALBAP00709 142 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 ETV1P50549 477 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 DEFB131AP59861 70 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 IGSF11Q5DX21 431 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 TTC23Q5W5X9 447 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
PVT1-220ENST00000524165 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 TMEM116Q8NCL8 245 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 CMSS1Q9BQ75 279 aaKnown RBP12.46□□□□□ -0.41
PVT1-220ENST00000524165 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.41
PVT1-220ENST00000524165 MRPS7Q9Y2R9 242 aaKnown RBP12.46□□□□□ -0.41
PVT1-220ENST00000524165 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.41
PVT1-220ENST00000524165 FAT1Q14517 4588 aa12.45□□□□□ -0.42
PVT1-220ENST00000524165 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
PVT1-220ENST00000524165 TMEM14DPA8MWL7 114 aa12.45□□□□□ -0.42
PVT1-220ENST00000524165 CD5P06127 495 aa12.45□□□□□ -0.42
PVT1-220ENST00000524165 SSX1Q16384 188 aa12.45□□□□□ -0.42
PVT1-220ENST00000524165 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 FCGR1AP12314 374 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 C4BPBP20851 252 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 RPL8P62917 257 aaKnown RBP12.44□□□□□ -0.42
PVT1-220ENST00000524165 QRFPP83859 136 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 C1orf100Q5SVJ3 147 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 KCTD9Q7L273 389 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 FAM89BQ8N5H3 189 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 RHOXF1Q8NHV9 184 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 LPAR5Q9H1C0 372 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 ORC6Q9Y5N6 252 aa12.44□□□□□ -0.42
PVT1-220ENST00000524165 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 FOXI3A8MTJ6 420 aaPredicted RBP12.43□□□□□ -0.42
PVT1-220ENST00000524165 CYB5BO43169 146 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 BPNT1O95861 308 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 Q5VSD8 79 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 LYPD1Q8N2G4 141 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
PVT1-220ENST00000524165 KCNK15Q9H427 330 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 AP4S1Q9Y587 144 aa12.43□□□□□ -0.42
PVT1-220ENST00000524165 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 F8W735 103 aaPredicted RBP12.42□□□□□ -0.42
PVT1-220ENST00000524165 ALPLP05186 524 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 HLA-GP17693 338 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 CRHBPP24387 322 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 DCKP27707 260 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 TMEM50BP56557 158 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 ZNF66Q6ZN08 573 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 ZFP41Q8N8Y5 198 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 OR4S2Q8NH73 311 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 CENPNQ96H22 339 aaPredicted RBP12.42□□□□□ -0.42
PVT1-220ENST00000524165 OR10C1Q96KK4 312 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 SRSF8Q9BRL6 282 aaKnown RBP12.42□□□□□ -0.42
PVT1-220ENST00000524165 MED4Q9NPJ6 270 aa12.42□□□□□ -0.42
PVT1-220ENST00000524165 IGHV3-49A0A0A0MS15 119 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 OR2B8PP59922 312 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 KRTAP10-2P60368 255 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 OR2B11Q5JQS5 317 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 FRZBQ92765 325 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 DGCR14Q96DF8 476 aaKnown RBP12.41□□□□□ -0.42
PVT1-220ENST00000524165 ARHGAP5-AS1Q96IT6 56 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 GINS4Q9BRT9 223 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 PECRQ9BY49 303 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 YTHDF1Q9BYJ9 559 aaKnown RBP12.41□□□□□ -0.42
PVT1-220ENST00000524165 MS4A6AQ9H2W1 248 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 TMED3Q9Y3Q3 217 aa12.41□□□□□ -0.42
PVT1-220ENST00000524165 DNASE2O00115 360 aaPredicted RBP12.4□□□□□ -0.42
PVT1-220ENST00000524165 CDK1P06493 297 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 SPART-AS1P0CW21 52 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 MAPK3P27361 379 aaPredicted RBP12.4□□□□□ -0.42
PVT1-220ENST00000524165 PLA2G7Q13093 441 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 ZIK1Q3SY52 487 aaPredicted RBP12.4□□□□□ -0.42
PVT1-220ENST00000524165 DNAL1Q4LDG9 190 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 ZNF414Q96IQ9 312 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
PVT1-220ENST00000524165 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
PVT1-220ENST00000524165 SAC3D1A6NKF1 404 aa12.39□□□□□ -0.43
PVT1-220ENST00000524165 GYG2O15488 501 aa12.39□□□□□ -0.43
PVT1-220ENST00000524165 RPL30P62888 115 aaKnown RBP12.39□□□□□ -0.43
PVT1-220ENST00000524165 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
PVT1-220ENST00000524165 H1FOOQ8IZA3 346 aaPredicted RBP12.39□□□□□ -0.43
PVT1-220ENST00000524165 FAM24BQ8N5W8 94 aa12.39□□□□□ -0.43
PVT1-220ENST00000524165 J3QL48 77 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 RAB27BO00194 218 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 NUPL2O15504 423 aaKnown RBP12.38□□□□□ -0.43
PVT1-220ENST00000524165 HRASP01112 189 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 CTSGP08311 255 aa12.38□□□□□ -0.43
PVT1-220ENST00000524165 CD36P16671 472 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms