RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 PSMG3Q9BT73 122 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-211ENST00000523062 HIPK2Q9H2X6 1198 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ENY2Q9NPA8 101 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM14BQ9NUH8 114 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 BET1LQ9NYM9 111 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 TCF19Q9Y242 345 aa5.57□□□□□ -1.52
CSMD1-211ENST00000523062 AMMECR1Q9Y4X0 333 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-211ENST00000523062 ZZEF1O43149 2961 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 TRAV3A0A0B4J244 114 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 UBE2L5PA0A1B0GUS4 154 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 C22orf46C9J442 243 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 H7C2Y5 167 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 M0R1W7 72 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 UPK2O00526 184 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 SHOXO15266 292 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 IL6RP08887 468 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 SAA1P0DJI8 122 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 MC5RP33032 325 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 CDKN1AP38936 164 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 VDAC2P45880 294 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 HSPE1P61604 102 aaKnown RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 RUNX1Q01196 453 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 LRRC75BQ2VPJ9 315 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 HLA-DRB5Q30154 266 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 SPINK9Q5DT21 86 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 THNSL2Q86YJ6 484 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 PUSL1Q8N0Z8 303 aaKnown RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 KIR3DL3Q8N743 410 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 BEND2Q8NDZ0 799 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 LFNGQ8NES3 379 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 BPIFCQ8NFQ6 507 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 OR10P1Q8NGE3 313 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 OR4A5Q8NH83 315 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 LYPD6BQ8NI32 183 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 NARS2Q96I59 477 aaKnown RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 LINC00052Q96N35 136 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 SSBP3Q9BWW4 388 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 CLEC7AQ9BXN2 247 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 UQCC1Q9NVA1 299 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 FKBP11Q9NYL4 201 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 ONECUT1Q9UBC0 465 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 ZNF257Q9Y2Q1 563 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 WASHC3Q9Y3C0 194 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 KLF2Q9Y5W3 355 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 YLPM1P49750 1951 aaKnown RBP5.56□□□□□ -1.52
CSMD1-211ENST00000523062 MALRD1Q5VYJ5 2156 aa5.56□□□□□ -1.52
CSMD1-211ENST00000523062 LOC105371242A0A075B767 164 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 PMS2P5A8MQ11 134 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 C1QL1O75973 258 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 KBTBD11O94819 623 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 IFNA10P01566 189 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 IGLV1-47P01700 117 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 IGKV1-16P04430 117 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 USF1P22415 310 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-211ENST00000523062 COX7A1P24310 79 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 REG1BP48304 166 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 RAB2AP61019 212 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 RPS16P62249 146 aaKnown RBP5.55□□□□□ -1.52
CSMD1-211ENST00000523062 RAB11AP62491 216 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 TLE4Q04727 773 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 VWC2Q2TAL6 325 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 VMA21Q3ZAQ7 101 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 OR4C13Q8NGP0 309 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 OR5B3Q8NH48 314 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 VSTM2AQ8TAG5 236 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 TAF15Q92804 592 aaKnown RBP eCLIP5.55□□□□□ -1.52
CSMD1-211ENST00000523062 LHX4Q969G2 390 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 FLYWCH2Q96CP2 140 aaKnown RBP5.55□□□□□ -1.52
CSMD1-211ENST00000523062 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 PLEKHA3Q9HB20 300 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 TREM1Q9NP99 234 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 OR51B2Q9Y5P1 312 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 ADGRG4Q8IZF6 3080 aa5.55□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM218A2RU14 115 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 BTBD17A6NE02 478 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 SRRM4A7MD48 611 aaKnown RBP5.54□□□□□ -1.52
CSMD1-211ENST00000523062 BUB1B-PAK6H3BSN5 160 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 ENSAO43768 121 aaKnown RBP5.54□□□□□ -1.52
CSMD1-211ENST00000523062 IGHV2-5P01817 119 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 HBE1P02100 147 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 FGF7P21781 194 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 NPY1RP25929 384 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 LGALS7P47929 136 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 FHITP49789 147 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 ATP5IP56385 69 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-211ENST00000523062 RPL8P62917 257 aaKnown RBP5.54□□□□□ -1.52
CSMD1-211ENST00000523062 DLK1P80370 383 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 SERF2P84101 59 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 PRCDQ00LT1 54 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 PNKDQ8N490 385 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 SLC24A4Q8NFF2 622 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 OR4P4Q8NGL7 312 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 OR1L8Q8NGR8 309 aa5.54□□□□□ -1.52
CSMD1-211ENST00000523062 TMEM167AQ8TBQ9 72 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms