RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-210	ENST00000522843	ZNF880	Q6PDB4	577 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	HOGA1	Q86XE5	327 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	FAM58A	Q8N1B3	248 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	NPIPB3	Q92617	1050 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	ARHGAP5-AS1	Q96IT6	56 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR4C12	Q96R67	309 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	S1PR3	Q99500	378 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	NICN1	Q9BSH3	213 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR51J1	Q9H342	316 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	GHITM	Q9H3K2	345 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	KCNK15	Q9H427	330 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	NCOR1P1	Q9H4R4	102 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	TUBA4B	Q9H853	241 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	SLC2A8	Q9NY64	477 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	TAS2R3	Q9NYW6	316 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	NUBP2	Q9Y5Y2	271 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843	WSB1	Q9Y6I7	421 aa		4.98	□□□□□ -1.61
SDCBP-210	ENST00000522843		A0A1B0GVG6	124 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	TMEM235	A6NFC5	223 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	PRSS47	A8MTI9	375 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	ZNF736	B4DX44	427 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	GEMIN2	O14893	280 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	SOX15	O60248	233 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	DIRAS3	O95661	229 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	NAPSA	O96009	420 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	TCRB	P04435	133 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	IL5	P05113	134 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	LGALS1	P09382	135 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	AKAIN1	P0CW23	69 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	TRAPPC2	P0DI81	140 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	TRAPPC2B	P0DI82	140 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	BCL3	P20749	454 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	SERPINA2	P20848	420 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	NFYB	P25208	207 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	HLA-DMA	P28067	261 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	REG1B	P48304	166 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	KCNJ3	P48549	501 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	INPP1	P49441	399 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	F2RL1	P55085	397 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	AES	Q08117	197 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	ACTBL2	Q562R1	376 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	ZNF57	Q68EA5	555 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	STEAP1B	Q6NZ63	245 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	PLET1	Q6UQ28	207 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	DHRS11	Q6UWP2	260 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR8H3	Q8N146	312 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	NRAC	Q8N912	160 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	CHST4	Q8NCG5	386 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR5D18	Q8NGL1	313 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR10K1	Q8NGX5	313 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	OR9G1	Q8NH87	305 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	CASTOR1	Q8WTX7	329 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	SLAMF9	Q96A28	289 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	COQ2	Q96H96	371 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	NEDD4L	Q96PU5	975 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	OVOL2	Q9BRP0	275 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	WFDC10A	Q9H1F0	79 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	GAL3ST2	Q9H3Q3	398 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	PLEKHA3	Q9HB20	300 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	PLEKHJ1	Q9NW61	149 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	PSG11	Q9UQ72	335 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	FAT1	Q14517	4588 aa		4.97	□□□□□ -1.61
SDCBP-210	ENST00000522843	TRGV10	A0A0A0MS01	117 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	TRAV24	A0A0B4J272	114 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	IGHV1-3	A0A0C4DH29	117 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843		A0A1W2PPE3	182 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ODAM	A1E959	279 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	FUOM	A2VDF0	154 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	C7orf66	A4D0T2	115 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	TEX22	C9J3V5	150 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	INMT-MINDY4	F8WBC2	141 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	SIRPB1	O00241	398 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	SH2D1B	O14796	132 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ATP6V0E1	O15342	81 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	RGS11	O94810	467 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	NDUFB6	O95139	128 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	CD3D	P04234	171 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	PTHLH	P12272	177 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	RAB7A	P51149	207 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	BCAP31	P51572	246 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	LINC00205	P59089	165 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	GNG2	P59768	71 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	MADCAM1	Q13477	382 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	PIGY	Q3MUY2	71 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	C6orf201	Q7Z4U5	140 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ZNF554	Q86TJ5	538 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	LHFPL1	Q86WI0	220 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	CADM3	Q8N126	398 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ARRDC1	Q8N5I2	433 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	TERB2	Q8NHR7	220 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	OSR1	Q8TAX0	266 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ENKUR	Q8TC29	256 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	SNAPC3	Q92966	411 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	EMG1	Q92979	244 aa	Known RBP	4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	PRRT1	Q99946	306 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	SULT4A1	Q9BR01	284 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	FAAP24	Q9BTP7	215 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	GLS2	Q9UI32	602 aa		4.96	□□□□□ -1.62
SDCBP-210	ENST00000522843	ELF5	Q9UKW6	265 aa	Predicted RBP	4.96	□□□□□ -1.62

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