RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
CLK4-210ENST00000522136 FOXRED2Q8IWF2 684 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 C5orf56Q8N8D9 126 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 OR4A5Q8NH83 315 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 NEURL2Q9BR09 285 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 MAGT1Q9H0U3 335 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 MOB4Q9Y3A3 225 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 NSD1Q96L73 2696 aaPredicted RBP10.63□□□□□ -0.71
CLK4-210ENST00000522136 CA2P00918 260 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 MBPP02686 304 aaPredicted RBP10.63□□□□□ -0.71
CLK4-210ENST00000522136 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
CLK4-210ENST00000522136 SRSF4Q08170 494 aaKnown RBP10.63□□□□□ -0.71
CLK4-210ENST00000522136 TNXAQ16473 311 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 LRRC37A5PQ49AS3 106 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 RASL11BQ9BPW5 248 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 COA4Q9NYJ1 87 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 PRNDQ9UKY0 176 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 OR51B2Q9Y5P1 312 aa10.63□□□□□ -0.71
CLK4-210ENST00000522136 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 DNAJC9-AS1A6NH13 148 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 CRLF1O75462 422 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 GIPP09681 153 aaPredicted RBP10.62□□□□□ -0.71
CLK4-210ENST00000522136 RAB32Q13637 225 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 HSPB9Q9BQS6 159 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 HINT2Q9BX68 163 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 NMES1Q9C002 83 aa10.62□□□□□ -0.71
CLK4-210ENST00000522136 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
CLK4-210ENST00000522136 A0A1B0GW64 132 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 CGB1A6NKQ9 187 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 IFNA17P01571 189 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 NKX2-1P43699 371 aaPredicted RBP10.61□□□□□ -0.71
CLK4-210ENST00000522136 S100A10P60903 97 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 POLR2GP62487 172 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLK4-210ENST00000522136 BLCAPP62952 87 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 CX3CL1P78423 397 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 CYCSP99999 105 aaKnown RBP10.61□□□□□ -0.71
CLK4-210ENST00000522136 ID3Q02535 119 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 SCGB2A2Q13296 93 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 Q6ZS46 218 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 LSM5Q9Y4Y9 91 aaKnown RBP10.61□□□□□ -0.71
CLK4-210ENST00000522136 LINC01548A6NM66 108 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 FGF16O43320 207 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 ACTL6BO94805 426 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 RAP2BP61225 183 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 TNFRSF9Q07011 255 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 ZNF429Q86V71 674 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 OR2T35Q8NGX2 323 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 COMMD5Q9GZQ3 224 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 RBKSQ9H477 322 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 HSPB7Q9UBY9 170 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
CLK4-210ENST00000522136 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
CLK4-210ENST00000522136 IGHV7-81A0A0B4J1V7 117 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 CNIH1O95406 144 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 APELAP0DMC3 54 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 COMPP49747 757 aaPredicted RBP10.6□□□□□ -0.71
CLK4-210ENST00000522136 HSPE1P61604 102 aaKnown RBP10.6□□□□□ -0.71
CLK4-210ENST00000522136 NDPQ00604 133 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 FXYD3Q14802 87 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 C9orf152Q5JTZ5 239 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
CLK4-210ENST00000522136 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
CLK4-210ENST00000522136 TRAV14DV4A0A0A6YYC5 116 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 G3V3Q6 166 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 H0YIZ8 118 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 K7EPK0 472 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 GPR137BO60478 399 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 PFDN1O60925 122 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 HLA-DRB1P01911 266 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 IAPPP10997 89 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 RPL27AP46776 148 aaKnown RBP10.59□□□□□ -0.71
CLK4-210ENST00000522136 ZNF562Q6V9R5 426 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 C16orf82Q7Z2V1 217 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 GRPEL2Q8TAA5 225 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
CLK4-210ENST00000522136 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLK4-210ENST00000522136 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 RCL1Q9Y2P8 373 aaKnown RBP10.59□□□□□ -0.71
CLK4-210ENST00000522136 ZNF257Q9Y2Q1 563 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 FBXO7Q9Y3I1 522 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 MSGN1A6NI15 193 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 WRBO00258 174 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 SSSCA1O60232 199 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 MPC2O95563 127 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 PSMB6P28072 239 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 MAS1LP35410 378 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 SPCS3P61009 180 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 TMEM86BQ8N661 226 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 OR5B3Q8NH48 314 aa10.59□□□□□ -0.71
CLK4-210ENST00000522136 SRSF12Q8WXF0 261 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms