RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SPINK9Q5DT21 86 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 ZNF429Q86V71 674 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 PPP1R27Q86WC6 154 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 TMEM219Q86XT9 240 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OR11H4Q8NGC9 324 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OR8H1Q8NGG4 311 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 RBKSQ9H477 322 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OR5AC2Q9NZP5 309 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 MBD2Q9UBB5 411 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 DEDDO75618 318 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 AARDQ4LEZ3 155 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 PRSS54Q6PEW0 395 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 CLEC9AQ6UXN8 241 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 NOXA1Q86UR1 476 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 MMD2Q8IY49 270 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 COMMD5Q9GZQ3 224 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 TCF19Q9Y242 345 aa17.05■□□□□ 0.32
R3HCC1-208ENST00000522012 TEX50A0A1B0GTY4 177 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 CEBPZOSA8MTT3 80 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 FCN1O00602 326 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 SYNGR2O43760 224 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 CHST1O43916 411 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 MED6O75586 246 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 ACTL6BO94805 426 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 SLC25A4P12235 298 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 SPCS3P61009 180 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 HSPE1P61604 102 aaKnown RBP17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 GNB1P62873 340 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 C5orf64Q2M2E5 130 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 MRGPRG-AS1Q2M3A8 158 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 OR52E5Q8NH55 327 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 ZNF48Q96MX3 618 aaPredicted RBP17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 HINT2Q9BX68 163 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 TMEM160Q9NX00 188 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 CACFD1Q9UGQ2 172 aa17.04■□□□□ 0.32
R3HCC1-208ENST00000522012 L7N2F9 121 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 OR2F2O95006 317 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 IGHV4-59P01825 116 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 IAPPP10997 89 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 PVALBP20472 110 aaPredicted RBP17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 NKX2-5P52952 324 aaPredicted RBP17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 VAMP2P63027 116 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 TNXAQ16473 311 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 Q6YL49 198 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 GRPEL2Q8TAA5 225 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 DCUN1D4Q92564 292 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 HYLS1Q96M11 299 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 RBM14Q96PK6 669 aaKnown RBP17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 SLC25A33Q9BSK2 321 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 ZNF257Q9Y2Q1 563 aa17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 FLNAP21333 2647 aaKnown RBP17.03■□□□□ 0.32
R3HCC1-208ENST00000522012 A6NDX4 124 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 IER3P46695 156 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 EIF2B2P49770 351 aaKnown RBP17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 ZNF546Q86UE3 836 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 Q8N9W7 124 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 OR5B3Q8NH48 314 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 RASL11BQ9BPW5 248 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 TNFRSF19Q9NS68 423 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 PITPNC1Q9UKF7 332 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 ZANQ9Y493 2812 aa17.02■□□□□ 0.32
R3HCC1-208ENST00000522012 E5RGE8 158 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 CA2P00918 260 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 FGF2P09038 288 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 MAS1LP35410 378 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 C10orf55Q5SWW7 151 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 OR1L8Q8NGR8 309 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 DTD1Q8TEA8 209 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 RAB40CQ96S21 281 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 BTBD17A6NE02 478 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 KCNAB3O43448 404 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 LYL1P12980 280 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 HOXA1P49639 335 aaPredicted RBP17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 Q71RC1 249 aaPredicted RBP17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 SIGLECL1Q8N7X8 197 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 ENY2Q9NPA8 101 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 MOB4Q9Y3A3 225 aa17.01■□□□□ 0.31
R3HCC1-208ENST00000522012 ZNF469Q96JG9 3925 aaPredicted RBP17■□□□□ 0.31
R3HCC1-208ENST00000522012 ARPC5O15511 151 aa17■□□□□ 0.31
R3HCC1-208ENST00000522012 CNIH1O95406 144 aa17■□□□□ 0.31
R3HCC1-208ENST00000522012 PDLIM3Q53GG5 364 aaPredicted RBP17■□□□□ 0.31
R3HCC1-208ENST00000522012 OR5R1Q8NH85 324 aa17■□□□□ 0.31
R3HCC1-208ENST00000522012 PRDM13Q9H4Q3 707 aa17■□□□□ 0.31
R3HCC1-208ENST00000522012 GSX1Q9H4S2 264 aaPredicted RBP17■□□□□ 0.31
R3HCC1-208ENST00000522012 SVEP1Q4LDE5 3571 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 TMEM50AO95807 157 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 RPL27AP46776 148 aaKnown RBP16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 COMPP49747 757 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 PRCDQ00LT1 54 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 TMEM65Q6PI78 240 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 SSMEM1Q8WWF3 244 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 C11orf1Q9H5F2 150 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 PLEKHA3Q9HB20 300 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 NDUFA4L2Q9NRX3 87 aa16.99■□□□□ 0.31
R3HCC1-208ENST00000522012 CSPG4Q6UVK1 2322 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 E7EUB6 86 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 HOXA3O43365 443 aaPredicted RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 GPR137BO60478 399 aa16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 NUP62P37198 522 aaPredicted RBP16.98■□□□□ 0.31
R3HCC1-208ENST00000522012 CAV2P51636 162 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms