RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 RAB11AP62491 216 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 PRCDQ00LT1 54 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 TMEM170AQ8WVE7 144 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 GGACTQ9BVM4 153 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 CLEC7AQ9BXN2 247 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 PATZ1Q9HBE1 687 aaKnown RBP14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 ABCA4P78363 2273 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 hCG_1809904A0A1W2PP81 198 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 A0A1W2PPE2 198 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 A0A1W2PR64 198 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 A0A1W2PRV1 198 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 PRSS46E5RG02 174 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 IGLV1-47P01700 117 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 LIPFP07098 398 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 CD1BP29016 333 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 MC5RP33032 325 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 CDKN1AP38936 164 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 HNF4GQ14541 408 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 HLA-DRB5Q30154 266 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 SLC24A4Q8NFF2 622 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 HINT2Q9BX68 163 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 NPCDR1Q9BY65 106 aa14.99□□□□□ -0.01
TRAPPC9-210ENST00000521667 RBFOX3A6NFN3 312 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 C22orf46C9J442 243 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 NPY1RP25929 384 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 DLX1P56177 255 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 ZNF726P1Q15940 193 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 OR5B3Q8NH48 314 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 MBD3L1Q8WWY6 194 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 RCC1LQ96I51 464 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 SMDT1Q9H4I9 107 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 PLEKHA3Q9HB20 300 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 WDR83OSQ9Y284 106 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 KPTNQ9Y664 436 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 DCHS2Q6V1P9 2916 aa14.98□□□□□ -0.01
TRAPPC9-210ENST00000521667 TEX50A0A1B0GTY4 177 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 SNAPINO95295 136 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 IFNA4P05014 189 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 RNF224P0DH78 156 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 ZNF709Q8N972 641 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 BEND2Q8NDZ0 799 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 VSTM2AQ8TAG5 236 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 RARRES2Q99969 163 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 ONECUT1Q9UBC0 465 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 ZNF462Q96JM2 2506 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 COL12A1Q99715 3063 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 A6NNC1 897 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 C17orf112F2Z3M2 114 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 DLK1P80370 383 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 ACSM6Q6P461 480 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 OR4A5Q8NH83 315 aa14.97□□□□□ -0.01
TRAPPC9-210ENST00000521667 CA2P00918 260 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 MBP02144 154 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 OPN1MWP04001 364 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 OPN1MW2P0DN77 364 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 OPN1MW3P0DN78 364 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 USF1P22415 310 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 PRB3Q04118 309 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 TMEM167AQ8TBQ9 72 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 SSBP3Q9BWW4 388 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 SLC35B3Q9H1N7 401 aa14.96□□□□□ -0.01
TRAPPC9-210ENST00000521667 BUB1B-PAK6H3BSN5 160 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 COX7A1P24310 79 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 GPR6P46095 362 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 RPL8P62917 257 aaKnown RBP14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 ZNF787Q6DD87 383 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 LCN15Q6UWW0 184 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 SSX7Q7RTT5 188 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 SMCO3A2RU48 225 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 DNASE2O00115 360 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 MPDU1O75352 247 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 HAGHQ16775 308 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 FFAR4Q5NUL3 377 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 RPP25LQ8N5L8 163 aaKnown RBP14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 CLDND2Q8NHS1 167 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 COMMD5Q9GZQ3 224 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 AMMECR1Q9Y4X0 333 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 DOCK11Q5JSL3 2073 aa14.95□□□□□ -0.02
TRAPPC9-210ENST00000521667 LOC105371242A0A075B767 164 aa14.94□□□□□ -0.02
TRAPPC9-210ENST00000521667 NDUFS7O75251 213 aa14.94□□□□□ -0.02
TRAPPC9-210ENST00000521667 ZNF506Q5JVG8 444 aa14.94□□□□□ -0.02
TRAPPC9-210ENST00000521667 TREML4Q6UXN2 200 aa14.94□□□□□ -0.02
TRAPPC9-210ENST00000521667 MAP1LC3B2A6NCE7 125 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 LGALS7P47929 136 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 NPBWR1P48145 328 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 EFNA4P52798 201 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 VMA21Q3ZAQ7 101 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 PNKDQ8N490 385 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 Q8N7P7 452 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 OR4P4Q8NGL7 312 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 OR10G4Q8NGN3 311 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 OR10G9Q8NGN4 311 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 OR10G7Q8NGN6 311 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 MAP1LC3BQ9GZQ8 125 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 TET2Q6N021 2002 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 IGHV3-72A0A0B4J1Y9 119 aa14.93□□□□□ -0.02
TRAPPC9-210ENST00000521667 ENSAO43768 121 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms