RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 PLET1Q6UQ28 207 aa13.69□□□□□ -0.22
TRAM1-203ENST00000520700 ZNF429Q86V71 674 aa13.69□□□□□ -0.22
TRAM1-203ENST00000520700 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
TRAM1-203ENST00000520700 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
TRAM1-203ENST00000520700 RRNAD1Q96FB5 475 aaKnown RBP13.69□□□□□ -0.22
TRAM1-203ENST00000520700 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
TRAM1-203ENST00000520700 FBXO7Q9Y3I1 522 aa13.69□□□□□ -0.22
TRAM1-203ENST00000520700 BRI3O95415 125 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 HLA-AP01891 365 aaKnown RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 AKR1C2P52895 323 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 SLC35B1P78383 322 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 CENPVQ7Z7K6 275 aaPredicted RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 OR5B3Q8NH48 314 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 MITD1Q8WV92 249 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 WFDC12Q8WWY7 111 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 NOL4LQ96MY1 436 aaPredicted RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 SPIN2AQ99865 258 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 SPIN2BQ9BPZ2 258 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 SRSF8Q9BRL6 282 aaKnown RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 ZNF747Q9BV97 191 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 PARP11Q9NR21 331 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 FOXA2Q9Y261 457 aaPredicted RBP13.68□□□□□ -0.22
TRAM1-203ENST00000520700 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
TRAM1-203ENST00000520700 TRAV41A0A0B4J266 112 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 A0A0B4J293 547 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
TRAM1-203ENST00000520700 RAB25P57735 213 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 OR2B8PP59922 312 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 GNB1P62873 340 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 C12orf54Q6X4T0 127 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 SLC35G3Q8N808 338 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 COA4Q9NYJ1 87 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 CACFD1Q9UGQ2 172 aa13.67□□□□□ -0.22
TRAM1-203ENST00000520700 TEX50A0A1B0GTY4 177 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 INMT-MINDY4F8WBC2 141 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 PRAF2O60831 178 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 IGLV1-40P01703 118 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 IGHG4P01861 327 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 SLC25A6P12236 298 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 Q6ZRM9 215 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 LYZL2Q7Z4W2 148 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 RNF152Q8N8N0 203 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 LFNGQ8NES3 379 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 OR1L8Q8NGR8 309 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 OR4A16Q8NH70 328 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 COQ8AQ8NI60 647 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 GRPEL2Q8TAA5 225 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
TRAM1-203ENST00000520700 CASTOR1Q8WTX7 329 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 GPR146Q96CH1 333 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 NDUFA4L2Q9NRX3 87 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 LINC00527Q9UJ94 153 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 TMED3Q9Y3Q3 217 aa13.66□□□□□ -0.22
TRAM1-203ENST00000520700 A0A0G2JRQ6 117 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 A0A1B0GW64 132 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 E7EUB6 86 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 G3V318 75 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 ELANEP08246 267 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 HSPE1P61604 102 aaKnown RBP13.65□□□□□ -0.22
TRAM1-203ENST00000520700 KLK9Q2XQG4 91 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 TEX38Q6PEX7 206 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 HSD17B13Q7Z5P4 300 aaPredicted RBP13.65□□□□□ -0.22
TRAM1-203ENST00000520700 TTC9CQ8N5M4 171 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 OR5M8Q8NGP6 311 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 SPATA3Q8NHX4 192 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 CITED1Q99966 193 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 FAM103A1Q9BTL3 118 aaKnown RBP13.65□□□□□ -0.22
TRAM1-203ENST00000520700 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.65□□□□□ -0.22
TRAM1-203ENST00000520700 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 KLK9Q9UKQ9 250 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 OR51B2Q9Y5P1 312 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 WSB1Q9Y6I7 421 aa13.65□□□□□ -0.22
TRAM1-203ENST00000520700 TENM1Q9UKZ4 2725 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 A0A1B0GU03 582 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 H3BUA1 57 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 HAX1O00165 279 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 KRTAP10-3P60369 221 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 CD83Q01151 205 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 FOXE3Q13461 319 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 PDLIM3Q53GG5 364 aaPredicted RBP13.64□□□□□ -0.23
TRAM1-203ENST00000520700 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
TRAM1-203ENST00000520700 RNASE11Q8TAA1 199 aaKnown RBP13.64□□□□□ -0.23
TRAM1-203ENST00000520700 ABHD5Q8WTS1 349 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms