RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 FLI1Q01543 452 aaPredicted RBP6.88□□□□□ -1.31
HMGB4-203ENST00000519684 AVPI1Q5T686 147 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 PDPNQ86YL7 162 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 ZNF596Q8TC21 504 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 FLYWCH2Q96CP2 140 aaKnown RBP6.88□□□□□ -1.31
HMGB4-203ENST00000519684 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 NEIL1Q96FI4 390 aaPredicted RBP6.88□□□□□ -1.31
HMGB4-203ENST00000519684 MANBALQ9NQG1 85 aa6.88□□□□□ -1.31
HMGB4-203ENST00000519684 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 LAMA5O15230 3695 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 ICE1Q9Y2F5 2266 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 LYNX1G3V0Z9 82 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 FSTL3O95633 263 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 CA2P00918 260 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 LYNX1P0DP58 116 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 COL8A2P25067 703 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PAX6P26367 422 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OPRK1P41145 380 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 CDC34P49427 236 aaPredicted RBP6.87□□□□□ -1.31
HMGB4-203ENST00000519684 RAB31Q13636 194 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PMS2P11Q13670 270 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 LY6DQ14210 128 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 UNQ6494/PRO21346Q6UXR6 183 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TGIF2LXQ8IUE1 241 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR5AN1Q8NGI8 311 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 VSTM2AQ8TAG5 236 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TMEM204Q9BSN7 226 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TMEM133Q9H2Q1 129 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PRORYQ9H606 182 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TUBA4BQ9H853 241 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 WASHC3Q9Y3C0 194 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TET2Q6N021 2002 aaPredicted RBP6.87□□□□□ -1.31
HMGB4-203ENST00000519684 A0A087X0M5 115 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TEX50A0A1B0GTY4 177 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1B0GX30 115 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1W2PPV4 95 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 HMGB3O15347 200 aaKnown RBP6.87□□□□□ -1.31
HMGB4-203ENST00000519684 IGHV2-70P01814 119 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 IL6RP08887 468 aaPredicted RBP6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PRRX1P54821 245 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
HMGB4-203ENST00000519684 CDSNQ15517 529 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 SLC35E3Q7Z769 313 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR8B3Q8NGG8 313 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR4C13Q8NGP0 309 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR4A5Q8NH83 315 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 TIMD4Q96H15 378 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 OR8B2Q96RD0 313 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 PCGF1Q9BSM1 259 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 COMMD5Q9GZQ3 224 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 CBLN4Q9NTU7 201 aa6.87□□□□□ -1.31
HMGB4-203ENST00000519684 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 CEP295Q9C0D2 2601 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 SRRM4A7MD48 611 aaKnown RBP6.86□□□□□ -1.31
HMGB4-203ENST00000519684 COLCA2A8K830 154 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 OPN1MWP04001 364 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 MYOD1P15172 320 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 USF1P22415 310 aaPredicted RBP6.86□□□□□ -1.31
HMGB4-203ENST00000519684 MC5RP33032 325 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 TNFRSF14Q92956 283 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 MIOXQ9UGB7 285 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 DOCK11Q5JSL3 2073 aa6.86□□□□□ -1.31
HMGB4-203ENST00000519684 hCG_1809904A0A1W2PP81 198 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1W2PPE2 198 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1W2PR64 198 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1W2PRV1 198 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 FNDC10F2Z333 226 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB4-203ENST00000519684 OR2C1O95371 312 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 MT-ND4LP03901 98 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 ZNF137PP52743 207 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 RPL8P62917 257 aaKnown RBP6.85□□□□□ -1.31
HMGB4-203ENST00000519684 MEF2BQ02080 365 aaPredicted RBP6.85□□□□□ -1.31
HMGB4-203ENST00000519684 VMA21Q3ZAQ7 101 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 OR1L8Q8NGR8 309 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 TMEM170AQ8WVE7 144 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 RAB1CQ92928 201 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 MGST2Q99735 147 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 DCHS1Q96JQ0 3298 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 PPIAL4CA0A0B4J2A2 164 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 A0A1W2PN81 502 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 B4DEV8 164 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 SEC14L6B5MCN3 397 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 ENSAO43768 121 aaKnown RBP6.85□□□□□ -1.31
HMGB4-203ENST00000519684 PPIAL4GP0DN37 164 aa6.85□□□□□ -1.31
HMGB4-203ENST00000519684 CHRNA7P36544 502 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms