RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 UBR2Q8IWV8 1755 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SIGLEC1Q9BZZ2 1709 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 PRDM15P57071 1507 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 A2ML1A8K2U0 1454 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SCAF11Q99590 1463 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 CEP164Q9UPV0 1460 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGHV2-26A0A0B4J1V2 119 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGKV1D-13A0A0B4J2D9 117 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGHV4-61A0A0C4DH41 118 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 C7orf71A4D174 169 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 CD300LBA8K4G0 201 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 FAM220BPB1ANY3 271 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 H7BYZ3 331 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ISLRO14498 428 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 AGPAT2O15120 278 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 GSTZ1O43708 216 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 DEDDO75618 318 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TNFP01375 233 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGLV1-44P01699 117 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGHV3-9P01782 118 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGHV4-59P01825 116 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 MT-ND4LP03901 98 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 FRMD6-AS1P0C7T7 363 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 PATE4P0C8F1 98 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SMIM10L2AP0DMW4 78 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SMIM10L2BP0DMW5 78 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IGKV1-13P0DP09 117 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 PSMB8P28062 276 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ZNF93P35789 620 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 RPL34P49207 117 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 P2RX1P51575 399 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 NDUFA8P51970 172 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 AKR1C2P52895 323 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 DEFA3P59666 94 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 UBA52P62987 128 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 HES1Q14469 280 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 PEA15Q15121 130 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 PDGFRLQ15198 375 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 RTL8BQ17RB0 113 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 IQCJQ1A5X6 159 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 FBXL19-AS1Q494R0 122 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ABCA11PQ4W5N1 156 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 FAM74A1Q5RGS3 127 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 MUC21Q5SSG8 566 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TMEM236Q5W0B7 351 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 Q5XG85 94 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 LCN15Q6UWW0 184 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TMEM14EPQ6UXP3 125 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ACP7Q6ZNF0 438 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TEX43Q6ZNM6 134 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 CLEC20AQ6ZU45 233 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SSX8Q7RTT4 187 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 LHFPL1Q86WI0 220 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ZCCHC24Q8N2G6 241 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TTC9CQ8N5M4 171 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 TEX29Q8N6K0 151 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 STPG4Q8N801 248 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 C11orf72Q8NBR9 251 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 OR11H7Q8NGC8 314 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 OR5D14Q8NGL3 314 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 OR10G8Q8NGN5 311 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 OR2T27Q8NH04 317 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 RPS4Y2Q8TD47 263 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 C15orf40Q8WUR7 153 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 KLK6Q92876 244 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 GNPNAT1Q96EK6 184 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 BORCS8Q96FH0 119 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 RNF185Q96GF1 192 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 C2orf50Q96LR7 162 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 OR2A5Q96R48 311 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SNRNP25Q9BV90 132 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 REG4Q9BYZ8 158 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 DPY30Q9C005 99 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 BANF2Q9H503 90 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 DUSP21Q9H596 190 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 EDA2RQ9HAV5 297 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 DEPPQ9NTK1 212 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 CACNG5Q9UF02 275 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 NUFIP1Q9UHK0 495 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 ANAPC10Q9UM13 185 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 FUT9Q9Y231 359 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 NOP16Q9Y3C1 178 aaKnown RBP2.03□□□□□ -2.08
PABPC1-211ENST00000519596 MPC1Q9Y5U8 109 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 HEBP2Q9Y5Z4 205 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 SCN10AQ9Y5Y9 1956 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 MYH13Q9UKX3 1938 aa2.03□□□□□ -2.08
PABPC1-211ENST00000519596 NRKQ7Z2Y5 1582 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 ABCC3O15438 1527 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 LMTK2Q8IWU2 1503 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 MAGI2Q86UL8 1455 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 KDM6AO15550 1401 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-211ENST00000519596 PLCH2O75038 1416 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 TNS2Q63HR2 1409 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 CITO14578 2027 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 FANCMQ8IYD8 2048 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 DOCK6Q96HP0 2047 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 MYH9P35579 1960 aaKnown RBP2.02□□□□□ -2.09
PABPC1-211ENST00000519596 IGHV3OR16-12A0A075B7B8 117 aa2.02□□□□□ -2.09
PABPC1-211ENST00000519596 IGHV3OR16-13A0A075B7E8 117 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms